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Cluster: MGYG000004827_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004827_9 MGYG000004827_9_11 10701 11870 - CE9
STP MGYG000004827_9 MGYG000004827_9_12 11989 13155 - SIS | SIS
TF MGYG000004827_9 MGYG000004827_9_13 13270 14001 - GntR
TC MGYG000004827_9 MGYG000004827_9_14 14187 15269 - 4.A.6.1.4
TC MGYG000004827_9 MGYG000004827_9_15 15259 16059 - 4.A.6.1.4
TC MGYG000004827_9 MGYG000004827_9_16 16150 16632 - 4.A.6.1.4
pfam MGYG000004827_9 MGYG000004827_9_17 16669 16950 - YajC
TC MGYG000004827_9 MGYG000004827_9_18 16950 17393 - 4.A.6.1.16
Gene ID: MGYG000004827_9_11
Type: CAZyme
Location: 10701 - 11870 (-)
Gene ID: MGYG000004827_9_12
Type: STP
Location: 11989 - 13155 (-)
Gene ID: MGYG000004827_9_13
Type: TF
Location: 13270 - 14001 (-)
Gene ID: MGYG000004827_9_14
Type: TC
Location: 14187 - 15269 (-)
Gene ID: MGYG000004827_9_15
Type: TC
Location: 15259 - 16059 (-)
Gene ID: MGYG000004827_9_16
Type: TC
Location: 16150 - 16632 (-)
Gene ID: MGYG000004827_9_17
Type: pfam
Location: 16669 - 16950 (-)
Gene ID: MGYG000004827_9_18
Type: TC
Location: 16950 - 17393 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004827_9_17 vegan > omnivore 1.13184 0.00566

🧭 Explore Read Mapping of CGC

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