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Cluster: MGYG000004827_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004827_4 MGYG000004827_4_29 28967 29761 - 3.A.1.34.1
TC MGYG000004827_4 MGYG000004827_4_30 29754 30677 - 3.A.1.34.1
TC MGYG000004827_4 MGYG000004827_4_31 30881 31861 - 3.A.1.34.1
NULL(UNKNOWN) MGYG000004827_4 MGYG000004827_4_32 32022 32807 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000004827_4 MGYG000004827_4_33 33068 34471 - tRNA-synt_2 | tRNA_anti-codon
TC MGYG000004827_4 MGYG000004827_4_34 34653 35216 - 4.A.1.2.6
peptidase MGYG000004827_4 MGYG000004827_4_35 35460 36359 + S09.UPW
TC MGYG000004827_4 MGYG000004827_4_36 36769 39129 + 9.A.8.1.6
TC MGYG000004827_4 MGYG000004827_4_37 39444 41108 + 4.A.1.1.3
TF MGYG000004827_4 MGYG000004827_4_38 41171 41923 - HTH_6
CAZyme MGYG000004827_4 MGYG000004827_4_39 42099 42842 + GH4
Gene ID: MGYG000004827_4_29
Type: TC
Location: 28967 - 29761 (-)
Gene ID: MGYG000004827_4_30
Type: TC
Location: 29754 - 30677 (-)
Gene ID: MGYG000004827_4_31
Type: TC
Location: 30881 - 31861 (-)
Gene ID: MGYG000004827_4_32
Type:
Location: 32022 - 32807 (-)
Gene ID: MGYG000004827_4_33
Type: pfam
Location: 33068 - 34471 (-)
Gene ID: MGYG000004827_4_34
Type: TC
Location: 34653 - 35216 (-)
Gene ID: MGYG000004827_4_35
Type: peptidase
Location: 35460 - 36359 (+)
Gene ID: MGYG000004827_4_36
Type: TC
Location: 36769 - 39129 (+)
Gene ID: MGYG000004827_4_37
Type: TC
Location: 39444 - 41108 (+)
Gene ID: MGYG000004827_4_38
Type: TF
Location: 41171 - 41923 (-)
Gene ID: MGYG000004827_4_39
Type: CAZyme
Location: 42099 - 42842 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004827_4_39 vegan > omnivore 1.23412 0.00566

🧭 Explore Read Mapping of CGC

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