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Cluster: MGYG000004808_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004808_14 MGYG000004808_14_3 2219 2650 + 4.A.6.1.15
pfam MGYG000004808_14 MGYG000004808_14_4 2650 2934 + YajC
TC MGYG000004808_14 MGYG000004808_14_5 3029 3511 + 4.A.6.1.4
TC MGYG000004808_14 MGYG000004808_14_6 3637 4446 + 4.A.6.1.4
TC MGYG000004808_14 MGYG000004808_14_7 4436 5536 + 4.A.6.1.4
TF MGYG000004808_14 MGYG000004808_14_8 5677 6405 + GntR
STP MGYG000004808_14 MGYG000004808_14_9 6431 7600 + SIS
CAZyme MGYG000004808_14 MGYG000004808_14_10 7686 8846 + CE9
TF MGYG000004808_14 MGYG000004808_14_11 9126 9920 - HTH_DeoR
TC MGYG000004808_14 MGYG000004808_14_12 10232 10648 + 4.A.6.1.10
TC MGYG000004808_14 MGYG000004808_14_13 10761 11516 + 4.A.6.1.13
TC MGYG000004808_14 MGYG000004808_14_14 11516 12346 + 4.A.6.1.1
pfam MGYG000004808_14 MGYG000004808_14_15 12553 13236 + Ribul_P_3_epim
TC MGYG000004808_14 MGYG000004808_14_16 13294 13779 + 4.A.6.1.2
Gene ID: MGYG000004808_14_3
Type: TC
Location: 2219 - 2650 (+)
Gene ID: MGYG000004808_14_4
Type: pfam
Location: 2650 - 2934 (+)
Gene ID: MGYG000004808_14_5
Type: TC
Location: 3029 - 3511 (+)
Gene ID: MGYG000004808_14_6
Type: TC
Location: 3637 - 4446 (+)
Gene ID: MGYG000004808_14_7
Type: TC
Location: 4436 - 5536 (+)
Gene ID: MGYG000004808_14_8
Type: TF
Location: 5677 - 6405 (+)
Gene ID: MGYG000004808_14_9
Type: STP
Location: 6431 - 7600 (+)
Gene ID: MGYG000004808_14_10
Type: CAZyme
Location: 7686 - 8846 (+)
Gene ID: MGYG000004808_14_11
Type: TF
Location: 9126 - 9920 (-)
Gene ID: MGYG000004808_14_12
Type: TC
Location: 10232 - 10648 (+)
Gene ID: MGYG000004808_14_13
Type: TC
Location: 10761 - 11516 (+)
Gene ID: MGYG000004808_14_14
Type: TC
Location: 11516 - 12346 (+)
Gene ID: MGYG000004808_14_15
Type: pfam
Location: 12553 - 13236 (+)
Gene ID: MGYG000004808_14_16
Type: TC
Location: 13294 - 13779 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004808_14_6 vegan > omnivore 1.05502 0.02320

🧭 Explore Read Mapping of CGC

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