Cluster: MGYG000004802_CGC9
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate: alpha-glucan
- Genome ID: MGYG000004802
- CGC Family ID: CGCFAM_00004
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004802_16 | MGYG000004802_16_8 | 5952 | 6989 | + | 8.A.5.1.3 |
| sulfatase | MGYG000004802_16 | MGYG000004802_16_9 | 6980 | 7786 | + | S1_24 |
| CAZyme | MGYG000004802_16 | MGYG000004802_16_10 | 8335 | 10311 | + | GH13_9 |
| CAZyme | MGYG000004802_16 | MGYG000004802_16_11 | 10281 | 12713 | + | GT35 |
| pfam | MGYG000004802_16 | MGYG000004802_16_12 | 12762 | 13898 | + | NTP_transferase | Hexapep_GlmU |
| pfam | MGYG000004802_16 | MGYG000004802_16_13 | 13920 | 15023 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | MGYG000004802_16 | MGYG000004802_16_14 | 15046 | 16509 | + | GT5 |
| CAZyme | MGYG000004802_16 | MGYG000004802_16_15 | 16521 | 19355 | + | GH13_39 | GH77 |
Gene ID: MGYG000004802_16_8
Type: TC
Location: 5952 - 6989 (+)
Type: TC
Location: 5952 - 6989 (+)
Gene ID: MGYG000004802_16_9
Type: sulfatase
Location: 6980 - 7786 (+)
Type: sulfatase
Location: 6980 - 7786 (+)
Gene ID: MGYG000004802_16_10
Type: CAZyme
Location: 8335 - 10311 (+)
Type: CAZyme
Location: 8335 - 10311 (+)
Gene ID: MGYG000004802_16_11
Type: CAZyme
Location: 10281 - 12713 (+)
Type: CAZyme
Location: 10281 - 12713 (+)
Gene ID: MGYG000004802_16_12
Type: pfam
Location: 12762 - 13898 (+)
Type: pfam
Location: 12762 - 13898 (+)
Gene ID: MGYG000004802_16_13
Type: pfam
Location: 13920 - 15023 (+)
Type: pfam
Location: 13920 - 15023 (+)
Gene ID: MGYG000004802_16_14
Type: CAZyme
Location: 15046 - 16509 (+)
Type: CAZyme
Location: 15046 - 16509 (+)
Gene ID: MGYG000004802_16_15
Type: CAZyme
Location: 16521 - 19355 (+)
Type: CAZyme
Location: 16521 - 19355 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UMGS1384
Genus
Allobutyricicoccus
Species
Allobutyricicoccus pentlandensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.