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Cluster: MGYG000004799_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004799_19 MGYG000004799_19_1 776 6604 + GH43_22 | GH43_27
CAZyme MGYG000004799_19 MGYG000004799_19_2 6621 9599 + GH43_22
TC MGYG000004799_19 MGYG000004799_19_3 9802 10863 + 3.A.1.2.14
TF MGYG000004799_19 MGYG000004799_19_4 10997 12520 + HTH_AraC | HTH_AraC
TC MGYG000004799_19 MGYG000004799_19_5 12524 14005 + 8.A.59.2.1
TC MGYG000004799_19 MGYG000004799_19_6 14152 15147 + 3.A.1.2.1
TC MGYG000004799_19 MGYG000004799_19_7 15264 16778 + 3.A.1.2.23
TC MGYG000004799_19 MGYG000004799_19_8 16781 17845 + 3.A.1.2.14
TC MGYG000004799_19 MGYG000004799_19_9 17847 18896 + 3.A.1.2.14
pfam MGYG000004799_19 MGYG000004799_19_10 18911 20395 + Fucose_iso_C
pfam MGYG000004799_19 MGYG000004799_19_11 20654 21229 + ECF-ribofla_trS
TC MGYG000004799_19 MGYG000004799_19_12 21252 22961 + 3.A.1.29.1
Gene ID: MGYG000004799_19_1
Type: CAZyme
Location: 776 - 6604 (+)
Gene ID: MGYG000004799_19_2
Type: CAZyme
Location: 6621 - 9599 (+)
Gene ID: MGYG000004799_19_3
Type: TC
Location: 9802 - 10863 (+)
Gene ID: MGYG000004799_19_4
Type: TF
Location: 10997 - 12520 (+)
Gene ID: MGYG000004799_19_5
Type: TC
Location: 12524 - 14005 (+)
Gene ID: MGYG000004799_19_6
Type: TC
Location: 14152 - 15147 (+)
Gene ID: MGYG000004799_19_7
Type: TC
Location: 15264 - 16778 (+)
Gene ID: MGYG000004799_19_8
Type: TC
Location: 16781 - 17845 (+)
Gene ID: MGYG000004799_19_9
Type: TC
Location: 17847 - 18896 (+)
Gene ID: MGYG000004799_19_10
Type: pfam
Location: 18911 - 20395 (+)
Gene ID: MGYG000004799_19_11
Type: pfam
Location: 20654 - 21229 (+)
Gene ID: MGYG000004799_19_12
Type: TC
Location: 21252 - 22961 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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