Cluster: MGYG000004792_CGC17
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004792
- CGC Family ID: CGCFAM_11043
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004792_16 | MGYG000004792_16_2 | 1428 | 2885 | + | GH13_18 |
| pfam | MGYG000004792_16 | MGYG000004792_16_3 | 2955 | 3614 | - | ABM | ABM |
| pfam | MGYG000004792_16 | MGYG000004792_16_4 | 3778 | 4725 | + | Dyp_perox_N | Dyp_perox_C |
| TC | MGYG000004792_16 | MGYG000004792_16_5 | 4971 | 6458 | + | 3.A.1.121.3 |
| peptidase | MGYG000004792_16 | MGYG000004792_16_6 | 6505 | 7221 | - | S09.UPW |
| TC | MGYG000004792_16 | MGYG000004792_16_7 | 7221 | 8678 | - | 2.A.3.1.18 |
| TC | MGYG000004792_16 | MGYG000004792_16_8 | 8820 | 10610 | - | 2.A.16.2.2 |
| pfam | MGYG000004792_16 | MGYG000004792_16_9 | 10677 | 11357 | - | Ubie_methyltran | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 |
| TC | MGYG000004792_16 | MGYG000004792_16_10 | 11369 | 12040 | - | 2.A.38.4.4 |
| TC | MGYG000004792_16 | MGYG000004792_16_11 | 12033 | 13376 | - | 2.A.38.4.1 |
| pfam | MGYG000004792_16 | MGYG000004792_16_12 | 13766 | 14923 | - | DUF87 | TrwB_AAD_bind |
| pfam | MGYG000004792_16 | MGYG000004792_16_13 | 15020 | 15550 | + | Acetyltransf_1 | Acetyltransf_7 |
| TC | MGYG000004792_16 | MGYG000004792_16_14 | 15703 | 17208 | + | 3.A.1.3.17 |
| TC | MGYG000004792_16 | MGYG000004792_16_15 | 17411 | 18373 | - | 2.A.47.3.3 |
Gene ID: MGYG000004792_16_2
Type: CAZyme
Location: 1428 - 2885 (+)
Type: CAZyme
Location: 1428 - 2885 (+)
Gene ID: MGYG000004792_16_3
Type: pfam
Location: 2955 - 3614 (-)
Type: pfam
Location: 2955 - 3614 (-)
Gene ID: MGYG000004792_16_4
Type: pfam
Location: 3778 - 4725 (+)
Type: pfam
Location: 3778 - 4725 (+)
Gene ID: MGYG000004792_16_5
Type: TC
Location: 4971 - 6458 (+)
Type: TC
Location: 4971 - 6458 (+)
Gene ID: MGYG000004792_16_6
Type: peptidase
Location: 6505 - 7221 (-)
Type: peptidase
Location: 6505 - 7221 (-)
Gene ID: MGYG000004792_16_7
Type: TC
Location: 7221 - 8678 (-)
Type: TC
Location: 7221 - 8678 (-)
Gene ID: MGYG000004792_16_8
Type: TC
Location: 8820 - 10610 (-)
Type: TC
Location: 8820 - 10610 (-)
Gene ID: MGYG000004792_16_9
Type: pfam
Location: 10677 - 11357 (-)
Type: pfam
Location: 10677 - 11357 (-)
Gene ID: MGYG000004792_16_10
Type: TC
Location: 11369 - 12040 (-)
Type: TC
Location: 11369 - 12040 (-)
Gene ID: MGYG000004792_16_11
Type: TC
Location: 12033 - 13376 (-)
Type: TC
Location: 12033 - 13376 (-)
Gene ID: MGYG000004792_16_12
Type: pfam
Location: 13766 - 14923 (-)
Type: pfam
Location: 13766 - 14923 (-)
Gene ID: MGYG000004792_16_13
Type: pfam
Location: 15020 - 15550 (+)
Type: pfam
Location: 15020 - 15550 (+)
Gene ID: MGYG000004792_16_14
Type: TC
Location: 15703 - 17208 (+)
Type: TC
Location: 15703 - 17208 (+)
Gene ID: MGYG000004792_16_15
Type: TC
Location: 17411 - 18373 (-)
Type: TC
Location: 17411 - 18373 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus sp905214235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.