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Cluster: MGYG000004788_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004788_28 MGYG000004788_28_3 2123 3550 - GH1
TC MGYG000004788_28 MGYG000004788_28_4 3547 5283 - 4.A.3.1.2
TC MGYG000004788_28 MGYG000004788_28_5 5338 5688 - 4.A.3.1.3
pfam MGYG000004788_28 MGYG000004788_28_6 5702 6556 - PRD | PRD | CAT_RBD
CAZyme MGYG000004788_28 MGYG000004788_28_7 6823 8244 - GH1
TC MGYG000004788_28 MGYG000004788_28_8 8258 9955 - 4.A.3.1.3
TC MGYG000004788_28 MGYG000004788_28_9 9974 10324 - 4.A.3.1.3
pfam MGYG000004788_28 MGYG000004788_28_10 10338 11189 - PRD | PRD | CAT_RBD
pfam MGYG000004788_28 MGYG000004788_28_11 11500 12318 - Hydrolase | S6PP | Hydrolase_3
TC MGYG000004788_28 MGYG000004788_28_12 12401 13681 - 4.A.3.2.2
peptidase MGYG000004788_28 MGYG000004788_28_13 14350 15363 + M38.UPW
TC MGYG000004788_28 MGYG000004788_28_14 15363 16703 + 2.A.40.3.2
TC MGYG000004788_28 MGYG000004788_28_15 16741 17871 - 9.B.34.1.3
TC MGYG000004788_28 MGYG000004788_28_16 18011 19141 - 9.B.34.1.3
pfam MGYG000004788_28 MGYG000004788_28_17 19271 20431 - Acetyltransf_9 | SCP2_2 | Acetyltransf_17
CAZyme MGYG000004788_28 MGYG000004788_28_18 20486 21571 - GH170
TC MGYG000004788_28 MGYG000004788_28_19 21593 22897 - 4.A.3.2.2
TF MGYG000004788_28 MGYG000004788_28_20 23034 23810 - HTH_6
CAZyme MGYG000004788_28 MGYG000004788_28_21 23950 25407 - GH1
CAZyme MGYG000004788_28 MGYG000004788_28_22 25432 26877 - GH1
TC MGYG000004788_28 MGYG000004788_28_23 26883 27218 - 4.A.3.2.8
TC MGYG000004788_28 MGYG000004788_28_24 27314 27622 - 4.A.3.2.4
Gene ID: MGYG000004788_28_3
Type: CAZyme
Location: 2123 - 3550 (-)
Gene ID: MGYG000004788_28_4
Type: TC
Location: 3547 - 5283 (-)
Gene ID: MGYG000004788_28_5
Type: TC
Location: 5338 - 5688 (-)
Gene ID: MGYG000004788_28_6
Type: pfam
Location: 5702 - 6556 (-)
Gene ID: MGYG000004788_28_7
Type: CAZyme
Location: 6823 - 8244 (-)
Gene ID: MGYG000004788_28_8
Type: TC
Location: 8258 - 9955 (-)
Gene ID: MGYG000004788_28_9
Type: TC
Location: 9974 - 10324 (-)
Gene ID: MGYG000004788_28_10
Type: pfam
Location: 10338 - 11189 (-)
Gene ID: MGYG000004788_28_11
Type: pfam
Location: 11500 - 12318 (-)
Gene ID: MGYG000004788_28_12
Type: TC
Location: 12401 - 13681 (-)
Gene ID: MGYG000004788_28_13
Type: peptidase
Location: 14350 - 15363 (+)
Gene ID: MGYG000004788_28_14
Type: TC
Location: 15363 - 16703 (+)
Gene ID: MGYG000004788_28_15
Type: TC
Location: 16741 - 17871 (-)
Gene ID: MGYG000004788_28_16
Type: TC
Location: 18011 - 19141 (-)
Gene ID: MGYG000004788_28_17
Type: pfam
Location: 19271 - 20431 (-)
Gene ID: MGYG000004788_28_18
Type: CAZyme
Location: 20486 - 21571 (-)
Gene ID: MGYG000004788_28_19
Type: TC
Location: 21593 - 22897 (-)
Gene ID: MGYG000004788_28_20
Type: TF
Location: 23034 - 23810 (-)
Gene ID: MGYG000004788_28_21
Type: CAZyme
Location: 23950 - 25407 (-)
Gene ID: MGYG000004788_28_22
Type: CAZyme
Location: 25432 - 26877 (-)
Gene ID: MGYG000004788_28_23
Type: TC
Location: 26883 - 27218 (-)
Gene ID: MGYG000004788_28_24
Type: TC
Location: 27314 - 27622 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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