Cluster: MGYG000004788_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004788
- CGC Family ID: CGCFAM_05546
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004788_15 | MGYG000004788_15_29 | 29209 | 30864 | + | 2.A.55.2.6 |
| pfam | MGYG000004788_15 | MGYG000004788_15_30 | 30909 | 31319 | - | Pep_deformylase |
| CAZyme | MGYG000004788_15 | MGYG000004788_15_31 | 31391 | 32200 | + | GT8 |
| TF | MGYG000004788_15 | MGYG000004788_15_32 | 32272 | 32604 | + | 0035318 |
| TC | MGYG000004788_15 | MGYG000004788_15_33 | 32615 | 33436 | + | 8.A.21.1.1 |
Gene ID: MGYG000004788_15_29
Type: TC
Location: 29209 - 30864 (+)
Type: TC
Location: 29209 - 30864 (+)
Gene ID: MGYG000004788_15_30
Type: pfam
Location: 30909 - 31319 (-)
Type: pfam
Location: 30909 - 31319 (-)
Gene ID: MGYG000004788_15_31
Type: CAZyme
Location: 31391 - 32200 (+)
Type: CAZyme
Location: 31391 - 32200 (+)
Gene ID: MGYG000004788_15_32
Type: TF
Location: 32272 - 32604 (+)
Type: TF
Location: 32272 - 32604 (+)
Gene ID: MGYG000004788_15_33
Type: TC
Location: 32615 - 33436 (+)
Type: TC
Location: 32615 - 33436 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Companilactobacillus
Species
Companilactobacillus farciminis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.