Cluster: MGYG000004786_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004786
- CGC Family ID: CGCFAM_11042
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004786_5 | MGYG000004786_5_73 | 64301 | 65560 | + | GH177 |
| pfam | MGYG000004786_5 | MGYG000004786_5_74 | 65588 | 66499 | - | AP_endonuc_2 |
| pfam | MGYG000004786_5 | MGYG000004786_5_75 | 66492 | 67589 | - | NAT_N | GNAT_C |
| TC | MGYG000004786_5 | MGYG000004786_5_76 | 67860 | 69314 | + | 3.A.1.1.10 |
| TC | MGYG000004786_5 | MGYG000004786_5_77 | 69430 | 70353 | + | 3.A.1.1.10 |
| TC | MGYG000004786_5 | MGYG000004786_5_78 | 70369 | 71253 | + | 3.A.1.1.29 |
Gene ID: MGYG000004786_5_73
Type: CAZyme
Location: 64301 - 65560 (+)
Type: CAZyme
Location: 64301 - 65560 (+)
Gene ID: MGYG000004786_5_74
Type: pfam
Location: 65588 - 66499 (-)
Type: pfam
Location: 65588 - 66499 (-)
Gene ID: MGYG000004786_5_75
Type: pfam
Location: 66492 - 67589 (-)
Type: pfam
Location: 66492 - 67589 (-)
Gene ID: MGYG000004786_5_76
Type: TC
Location: 67860 - 69314 (+)
Type: TC
Location: 67860 - 69314 (+)
Gene ID: MGYG000004786_5_77
Type: TC
Location: 69430 - 70353 (+)
Type: TC
Location: 69430 - 70353 (+)
Gene ID: MGYG000004786_5_78
Type: TC
Location: 70369 - 71253 (+)
Type: TC
Location: 70369 - 71253 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp900550955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.