Cluster: MGYG000004786_CGC30
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004786
- CGC Family ID: CGCFAM_04603
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004786_89 | MGYG000004786_89_1 | 134 | 1036 | + | 3.A.1.1.45 |
| TC | MGYG000004786_89 | MGYG000004786_89_2 | 1036 | 1878 | + | 3.A.1.1.45 |
| CAZyme | MGYG000004786_89 | MGYG000004786_89_3 | 2055 | 3122 | - | GT28 |
Gene ID: MGYG000004786_89_1
Type: TC
Location: 134 - 1036 (+)
Type: TC
Location: 134 - 1036 (+)
Gene ID: MGYG000004786_89_2
Type: TC
Location: 1036 - 1878 (+)
Type: TC
Location: 1036 - 1878 (+)
Gene ID: MGYG000004786_89_3
Type: CAZyme
Location: 2055 - 3122 (-)
Type: CAZyme
Location: 2055 - 3122 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp900550955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004786_89_1 | vegetarian > vegan | 1.55035 | 0.00290 |
| MGYG000004786_89_2 | vegetarian > vegan | 1.04403 | 0.00290 |