Cluster: MGYG000004786_CGC3
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004786
- CGC Family ID: CGCFAM_01850
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004786_1 | MGYG000004786_1_38 | 48481 | 49182 | - | 3.A.1.122.14 |
| peptidase | MGYG000004786_1 | MGYG000004786_1_39 | 49362 | 51116 | - | U69.UPW |
| NULL(UNKNOWN) | MGYG000004786_1 | MGYG000004786_1_40 | 51135 | 52466 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004786_1 | MGYG000004786_1_41 | 52489 | 53757 | - | GT4 |
| pfam | MGYG000004786_1 | MGYG000004786_1_42 | 53742 | 54890 | - | Glyco_trans_1_4 |
| CAZyme | MGYG000004786_1 | MGYG000004786_1_43 | 54920 | 56041 | - | GT4 |
| pfam | MGYG000004786_1 | MGYG000004786_1_44 | 56038 | 56889 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 |
| TC | MGYG000004786_1 | MGYG000004786_1_45 | 56886 | 57518 | - | 9.B.18.1.3 |
| pfam | MGYG000004786_1 | MGYG000004786_1_46 | 57522 | 59066 | - | HMGL-like | LeuA_dimer | HCS_D2 |
| TC | MGYG000004786_1 | MGYG000004786_1_47 | 59078 | 59437 | - | 3.A.11.1.1 |
Gene ID: MGYG000004786_1_38
Type: TC
Location: 48481 - 49182 (-)
Type: TC
Location: 48481 - 49182 (-)
Gene ID: MGYG000004786_1_39
Type: peptidase
Location: 49362 - 51116 (-)
Type: peptidase
Location: 49362 - 51116 (-)
Gene ID: MGYG000004786_1_40
Type:
Location: 51135 - 52466 (-)
Type:
Location: 51135 - 52466 (-)
Gene ID: MGYG000004786_1_41
Type: CAZyme
Location: 52489 - 53757 (-)
Type: CAZyme
Location: 52489 - 53757 (-)
Gene ID: MGYG000004786_1_42
Type: pfam
Location: 53742 - 54890 (-)
Type: pfam
Location: 53742 - 54890 (-)
Gene ID: MGYG000004786_1_43
Type: CAZyme
Location: 54920 - 56041 (-)
Type: CAZyme
Location: 54920 - 56041 (-)
Gene ID: MGYG000004786_1_44
Type: pfam
Location: 56038 - 56889 (-)
Type: pfam
Location: 56038 - 56889 (-)
Gene ID: MGYG000004786_1_45
Type: TC
Location: 56886 - 57518 (-)
Type: TC
Location: 56886 - 57518 (-)
Gene ID: MGYG000004786_1_46
Type: pfam
Location: 57522 - 59066 (-)
Type: pfam
Location: 57522 - 59066 (-)
Gene ID: MGYG000004786_1_47
Type: TC
Location: 59078 - 59437 (-)
Type: TC
Location: 59078 - 59437 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp900550955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.