Cluster: MGYG000004786_CGC28
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate: alpha-glucan
- Genome ID: MGYG000004786
- CGC Family ID: CGCFAM_00004
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004786_45 | MGYG000004786_45_10 | 10120 | 11007 | - | CE4 |
| pfam | MGYG000004786_45 | MGYG000004786_45_11 | 11199 | 11603 | - | dCMP_cyt_deam_1 |
| CAZyme | MGYG000004786_45 | MGYG000004786_45_12 | 11640 | 12806 | - | GH3 |
| CAZyme | MGYG000004786_45 | MGYG000004786_45_13 | 13012 | 15012 | + | GH13_9 |
| pfam | MGYG000004786_45 | MGYG000004786_45_14 | 15091 | 16263 | + | NTP_transferase | Hexapep_GlmU |
| pfam | MGYG000004786_45 | MGYG000004786_45_15 | 16298 | 17419 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | MGYG000004786_45 | MGYG000004786_45_16 | 17453 | 18895 | + | GT5 |
| TC | MGYG000004786_45 | MGYG000004786_45_17 | 19202 | 20614 | + | 2.A.40.1.2 |
Gene ID: MGYG000004786_45_10
Type: CAZyme
Location: 10120 - 11007 (-)
Type: CAZyme
Location: 10120 - 11007 (-)
Gene ID: MGYG000004786_45_11
Type: pfam
Location: 11199 - 11603 (-)
Type: pfam
Location: 11199 - 11603 (-)
Gene ID: MGYG000004786_45_12
Type: CAZyme
Location: 11640 - 12806 (-)
Type: CAZyme
Location: 11640 - 12806 (-)
Gene ID: MGYG000004786_45_13
Type: CAZyme
Location: 13012 - 15012 (+)
Type: CAZyme
Location: 13012 - 15012 (+)
Gene ID: MGYG000004786_45_14
Type: pfam
Location: 15091 - 16263 (+)
Type: pfam
Location: 15091 - 16263 (+)
Gene ID: MGYG000004786_45_15
Type: pfam
Location: 16298 - 17419 (+)
Type: pfam
Location: 16298 - 17419 (+)
Gene ID: MGYG000004786_45_16
Type: CAZyme
Location: 17453 - 18895 (+)
Type: CAZyme
Location: 17453 - 18895 (+)
Gene ID: MGYG000004786_45_17
Type: TC
Location: 19202 - 20614 (+)
Type: TC
Location: 19202 - 20614 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp900550955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.