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Cluster: MGYG000004786_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004786_39 MGYG000004786_39_5 2976 3821 - 3.A.1.149.1
TF MGYG000004786_39 MGYG000004786_39_6 3818 4198 - GntR
STP MGYG000004786_39 MGYG000004786_39_7 4392 4973 - TetR_N
TC MGYG000004786_39 MGYG000004786_39_8 5033 7339 - 3.A.1.137.2
pfam MGYG000004786_39 MGYG000004786_39_9 7533 7835 + Trns_repr_metal
TC MGYG000004786_39 MGYG000004786_39_10 7858 10362 + 3.A.3.5.15
pfam MGYG000004786_39 MGYG000004786_39_11 10900 12345 + Alk_phosphatase | Alk_phosphatase
TC MGYG000004786_39 MGYG000004786_39_12 12440 13609 + 9.B.141.1.1
CAZyme MGYG000004786_39 MGYG000004786_39_13 13678 15039 - GH1
pfam MGYG000004786_39 MGYG000004786_39_14 15283 16815 - Metallophos | 5_nucleotid_C
TC MGYG000004786_39 MGYG000004786_39_15 16818 17627 - 3.A.1.9.1
TC MGYG000004786_39 MGYG000004786_39_16 17641 18462 - 3.A.1.9.2
TC MGYG000004786_39 MGYG000004786_39_17 18459 19217 - 3.A.1.9.2
pfam MGYG000004786_39 MGYG000004786_39_18 19304 20338 - Phosphonate-bd
TF MGYG000004786_39 MGYG000004786_39_19 20474 21226 - HTH_6
TC MGYG000004786_39 MGYG000004786_39_20 21310 22656 - 2.A.66.1.33
Gene ID: MGYG000004786_39_5
Type: TC
Location: 2976 - 3821 (-)
Gene ID: MGYG000004786_39_6
Type: TF
Location: 3818 - 4198 (-)
Gene ID: MGYG000004786_39_7
Type: STP
Location: 4392 - 4973 (-)
Gene ID: MGYG000004786_39_8
Type: TC
Location: 5033 - 7339 (-)
Gene ID: MGYG000004786_39_9
Type: pfam
Location: 7533 - 7835 (+)
Gene ID: MGYG000004786_39_10
Type: TC
Location: 7858 - 10362 (+)
Gene ID: MGYG000004786_39_11
Type: pfam
Location: 10900 - 12345 (+)
Gene ID: MGYG000004786_39_12
Type: TC
Location: 12440 - 13609 (+)
Gene ID: MGYG000004786_39_13
Type: CAZyme
Location: 13678 - 15039 (-)
Gene ID: MGYG000004786_39_14
Type: pfam
Location: 15283 - 16815 (-)
Gene ID: MGYG000004786_39_15
Type: TC
Location: 16818 - 17627 (-)
Gene ID: MGYG000004786_39_16
Type: TC
Location: 17641 - 18462 (-)
Gene ID: MGYG000004786_39_17
Type: TC
Location: 18459 - 19217 (-)
Gene ID: MGYG000004786_39_18
Type: pfam
Location: 19304 - 20338 (-)
Gene ID: MGYG000004786_39_19
Type: TF
Location: 20474 - 21226 (-)
Gene ID: MGYG000004786_39_20
Type: TC
Location: 21310 - 22656 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004786_39_15 vegetarian > vegan 1.03165 0.00290
MGYG000004786_39_16 vegetarian > vegan 1.30985 0.00290
MGYG000004786_39_18 vegetarian > vegan 1.47949 0.00290

🧭 Explore Read Mapping of CGC

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