Cluster: MGYG000004786_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004786
- CGC Family ID: CGCFAM_03876
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004786_17 | MGYG000004786_17_24 | 31236 | 33356 | - | GH50 |
| TF | MGYG000004786_17 | MGYG000004786_17_25 | 33381 | 34811 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000004786_17 | MGYG000004786_17_26 | 34826 | 36553 | - | 9.B.33.1.1 |
| TC | MGYG000004786_17 | MGYG000004786_17_27 | 36780 | 37730 | + | 3.A.1.1.10 |
| TC | MGYG000004786_17 | MGYG000004786_17_28 | 37732 | 38619 | + | 3.A.1.1.10 |
Gene ID: MGYG000004786_17_24
Type: CAZyme
Location: 31236 - 33356 (-)
Type: CAZyme
Location: 31236 - 33356 (-)
Gene ID: MGYG000004786_17_25
Type: TF
Location: 33381 - 34811 (-)
Type: TF
Location: 33381 - 34811 (-)
Gene ID: MGYG000004786_17_26
Type: TC
Location: 34826 - 36553 (-)
Type: TC
Location: 34826 - 36553 (-)
Gene ID: MGYG000004786_17_27
Type: TC
Location: 36780 - 37730 (+)
Type: TC
Location: 36780 - 37730 (+)
Gene ID: MGYG000004786_17_28
Type: TC
Location: 37732 - 38619 (+)
Type: TC
Location: 37732 - 38619 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp900550955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.