Cluster: MGYG000004786_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004786
- CGC Family ID: CGCFAM_00029
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004786_15 | MGYG000004786_15_11 | 11410 | 12492 | - | GT4 |
| CAZyme | MGYG000004786_15 | MGYG000004786_15_12 | 12536 | 13498 | - | GT2 |
| CAZyme | MGYG000004786_15 | MGYG000004786_15_13 | 13516 | 14334 | - | GT2 |
| TC | MGYG000004786_15 | MGYG000004786_15_14 | 14345 | 15040 | - | 9.B.18.1.3 |
| pfam | MGYG000004786_15 | MGYG000004786_15_15 | 15051 | 16292 | - | DegT_DnrJ_EryC1 |
| TC | MGYG000004786_15 | MGYG000004786_15_16 | 16389 | 18368 | - | 9.B.18.2.1 |
Gene ID: MGYG000004786_15_11
Type: CAZyme
Location: 11410 - 12492 (-)
Type: CAZyme
Location: 11410 - 12492 (-)
Gene ID: MGYG000004786_15_12
Type: CAZyme
Location: 12536 - 13498 (-)
Type: CAZyme
Location: 12536 - 13498 (-)
Gene ID: MGYG000004786_15_13
Type: CAZyme
Location: 13516 - 14334 (-)
Type: CAZyme
Location: 13516 - 14334 (-)
Gene ID: MGYG000004786_15_14
Type: TC
Location: 14345 - 15040 (-)
Type: TC
Location: 14345 - 15040 (-)
Gene ID: MGYG000004786_15_15
Type: pfam
Location: 15051 - 16292 (-)
Type: pfam
Location: 15051 - 16292 (-)
Gene ID: MGYG000004786_15_16
Type: TC
Location: 16389 - 18368 (-)
Type: TC
Location: 16389 - 18368 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp900550955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.