Cluster: MGYG000004786_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004786
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004786_12 | MGYG000004786_12_2 | 589 | 2319 | + | GH2 |
| TF | MGYG000004786_12 | MGYG000004786_12_3 | 2574 | 2675 | - | MerR |
| pfam | MGYG000004786_12 | MGYG000004786_12_4 | 2725 | 4977 | - | UvrD-helicase |
| TC | MGYG000004786_12 | MGYG000004786_12_5 | 5282 | 6640 | - | 2.A.66.1.33 |
| TF | MGYG000004786_12 | MGYG000004786_12_6 | 6992 | 7783 | + | MerR |
| TC | MGYG000004786_12 | MGYG000004786_12_7 | 7921 | 9717 | + | 3.D.10.1.4 |
Gene ID: MGYG000004786_12_2
Type: CAZyme
Location: 589 - 2319 (+)
Type: CAZyme
Location: 589 - 2319 (+)
Gene ID: MGYG000004786_12_3
Type: TF
Location: 2574 - 2675 (-)
Type: TF
Location: 2574 - 2675 (-)
Gene ID: MGYG000004786_12_4
Type: pfam
Location: 2725 - 4977 (-)
Type: pfam
Location: 2725 - 4977 (-)
Gene ID: MGYG000004786_12_5
Type: TC
Location: 5282 - 6640 (-)
Type: TC
Location: 5282 - 6640 (-)
Gene ID: MGYG000004786_12_6
Type: TF
Location: 6992 - 7783 (+)
Type: TF
Location: 6992 - 7783 (+)
Gene ID: MGYG000004786_12_7
Type: TC
Location: 7921 - 9717 (+)
Type: TC
Location: 7921 - 9717 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp900550955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004786_12_7 | vegetarian > vegan | 1.11412 | 0.00290 |