Cluster: MGYG000004786_CGC13
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004786
- CGC Family ID: CGCFAM_04604
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004786_9 | MGYG000004786_9_23 | 22461 | 22934 | + | 3.D.1.5.1 |
| STP | MGYG000004786_9 | MGYG000004786_9_24 | 22956 | 23489 | + | HATPase_c |
| NULL(UNKNOWN) | MGYG000004786_9 | MGYG000004786_9_25 | 23493 | 23867 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004786_9 | MGYG000004786_9_26 | 23889 | 25679 | + | 3.D.1.5.1 |
| TC | MGYG000004786_9 | MGYG000004786_9_27 | 25702 | 27447 | + | 3.D.1.5.1 |
| pfam | MGYG000004786_9 | MGYG000004786_9_28 | 27640 | 28566 | + | MMR_HSR1 | FeoB_N |
| pfam | MGYG000004786_9 | MGYG000004786_9_29 | 28550 | 29191 | + | RNase_HII |
| CAZyme | MGYG000004786_9 | MGYG000004786_9_30 | 29188 | 33303 | + | GT39 |
| peptidase | MGYG000004786_9 | MGYG000004786_9_31 | 33317 | 34855 | + | S16.UNW |
| TC | MGYG000004786_9 | MGYG000004786_9_32 | 34858 | 35967 | + | 3.A.11.1.3 |
Gene ID: MGYG000004786_9_23
Type: TC
Location: 22461 - 22934 (+)
Type: TC
Location: 22461 - 22934 (+)
Gene ID: MGYG000004786_9_24
Type: STP
Location: 22956 - 23489 (+)
Type: STP
Location: 22956 - 23489 (+)
Gene ID: MGYG000004786_9_25
Type:
Location: 23493 - 23867 (+)
Type:
Location: 23493 - 23867 (+)
Gene ID: MGYG000004786_9_26
Type: TC
Location: 23889 - 25679 (+)
Type: TC
Location: 23889 - 25679 (+)
Gene ID: MGYG000004786_9_27
Type: TC
Location: 25702 - 27447 (+)
Type: TC
Location: 25702 - 27447 (+)
Gene ID: MGYG000004786_9_28
Type: pfam
Location: 27640 - 28566 (+)
Type: pfam
Location: 27640 - 28566 (+)
Gene ID: MGYG000004786_9_29
Type: pfam
Location: 28550 - 29191 (+)
Type: pfam
Location: 28550 - 29191 (+)
Gene ID: MGYG000004786_9_30
Type: CAZyme
Location: 29188 - 33303 (+)
Type: CAZyme
Location: 29188 - 33303 (+)
Gene ID: MGYG000004786_9_31
Type: peptidase
Location: 33317 - 34855 (+)
Type: peptidase
Location: 33317 - 34855 (+)
Gene ID: MGYG000004786_9_32
Type: TC
Location: 34858 - 35967 (+)
Type: TC
Location: 34858 - 35967 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp900550955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004786_9_25 | vegetarian > vegan | 1.51726 | 0.00290 |