Cluster: MGYG000004786_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004786
- CGC Family ID: CGCFAM_02720
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004786_1 | MGYG000004786_1_1 | 183 | 1274 | + | 9.B.146.1.3 |
| pfam | MGYG000004786_1 | MGYG000004786_1_2 | 1381 | 3720 | + | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C |
| CAZyme | MGYG000004786_1 | MGYG000004786_1_3 | 3842 | 6187 | - | GH31_15 |
| CAZyme | MGYG000004786_1 | MGYG000004786_1_4 | 6184 | 7482 | - | GH13 |
| TC | MGYG000004786_1 | MGYG000004786_1_5 | 7547 | 8371 | - | 3.A.1.1.36 |
| TC | MGYG000004786_1 | MGYG000004786_1_6 | 8382 | 9269 | - | 3.A.1.1.4 |
Gene ID: MGYG000004786_1_1
Type: TC
Location: 183 - 1274 (+)
Type: TC
Location: 183 - 1274 (+)
Gene ID: MGYG000004786_1_2
Type: pfam
Location: 1381 - 3720 (+)
Type: pfam
Location: 1381 - 3720 (+)
Gene ID: MGYG000004786_1_3
Type: CAZyme
Location: 3842 - 6187 (-)
Type: CAZyme
Location: 3842 - 6187 (-)
Gene ID: MGYG000004786_1_4
Type: CAZyme
Location: 6184 - 7482 (-)
Type: CAZyme
Location: 6184 - 7482 (-)
Gene ID: MGYG000004786_1_5
Type: TC
Location: 7547 - 8371 (-)
Type: TC
Location: 7547 - 8371 (-)
Gene ID: MGYG000004786_1_6
Type: TC
Location: 8382 - 9269 (-)
Type: TC
Location: 8382 - 9269 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp900550955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.