Cluster: MGYG000004780_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004780
- CGC Family ID: CGCFAM_05537
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004780_3 | MGYG000004780_3_125 | 131229 | 132635 | - | 2.A.6.2.5 |
| TC | MGYG000004780_3 | MGYG000004780_3_126 | 132692 | 135904 | - | 2.A.6.2.5 |
| TC | MGYG000004780_3 | MGYG000004780_3_127 | 135916 | 137184 | - | 2.A.6.2.5 |
| STP | MGYG000004780_3 | MGYG000004780_3_128 | 137412 | 138047 | + | TetR_N |
| TC | MGYG000004780_3 | MGYG000004780_3_129 | 138111 | 139787 | - | 3.A.1.120.6 |
| TC | MGYG000004780_3 | MGYG000004780_3_130 | 140129 | 141481 | + | 2.A.2.6.2 |
| CAZyme | MGYG000004780_3 | MGYG000004780_3_131 | 141556 | 143814 | + | GH65 |
Gene ID: MGYG000004780_3_125
Type: TC
Location: 131229 - 132635 (-)
Type: TC
Location: 131229 - 132635 (-)
Gene ID: MGYG000004780_3_126
Type: TC
Location: 132692 - 135904 (-)
Type: TC
Location: 132692 - 135904 (-)
Gene ID: MGYG000004780_3_127
Type: TC
Location: 135916 - 137184 (-)
Type: TC
Location: 135916 - 137184 (-)
Gene ID: MGYG000004780_3_128
Type: STP
Location: 137412 - 138047 (+)
Type: STP
Location: 137412 - 138047 (+)
Gene ID: MGYG000004780_3_129
Type: TC
Location: 138111 - 139787 (-)
Type: TC
Location: 138111 - 139787 (-)
Gene ID: MGYG000004780_3_130
Type: TC
Location: 140129 - 141481 (+)
Type: TC
Location: 140129 - 141481 (+)
Gene ID: MGYG000004780_3_131
Type: CAZyme
Location: 141556 - 143814 (+)
Type: CAZyme
Location: 141556 - 143814 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Neisseriaceae
Genus
Neisseria
Species
Neisseria sp000186165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.