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Cluster: MGYG000004780_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004780_3 MGYG000004780_3_30 28183 30291 + GH23
TC MGYG000004780_3 MGYG000004780_3_31 30512 31516 - 5.B.1.3.1
pfam MGYG000004780_3 MGYG000004780_3_32 31596 33026 - GatB_Yqey | GatB_N
TC MGYG000004780_3 MGYG000004780_3_33 33126 33746 - 1.A.62.2.1
pfam MGYG000004780_3 MGYG000004780_3_34 33843 35291 - Amidase
pfam MGYG000004780_3 MGYG000004780_3_35 35442 35732 - GatC
TC MGYG000004780_3 MGYG000004780_3_36 35957 36994 + 9.B.157.1.3
TC MGYG000004780_3 MGYG000004780_3_37 37006 37848 + 9.B.157.1.3
pfam MGYG000004780_3 MGYG000004780_3_38 37853 38353 + MreD
peptidase MGYG000004780_3 MGYG000004780_3_39 38358 40406 + X52.001
TC MGYG000004780_3 MGYG000004780_3_40 40399 41550 + 2.A.103.1.2
TC MGYG000004780_3 MGYG000004780_3_41 41552 42211 + 2.A.95.1.7
Gene ID: MGYG000004780_3_30
Type: CAZyme
Location: 28183 - 30291 (+)
Gene ID: MGYG000004780_3_31
Type: TC
Location: 30512 - 31516 (-)
Gene ID: MGYG000004780_3_32
Type: pfam
Location: 31596 - 33026 (-)
Gene ID: MGYG000004780_3_33
Type: TC
Location: 33126 - 33746 (-)
Gene ID: MGYG000004780_3_34
Type: pfam
Location: 33843 - 35291 (-)
Gene ID: MGYG000004780_3_35
Type: pfam
Location: 35442 - 35732 (-)
Gene ID: MGYG000004780_3_36
Type: TC
Location: 35957 - 36994 (+)
Gene ID: MGYG000004780_3_37
Type: TC
Location: 37006 - 37848 (+)
Gene ID: MGYG000004780_3_38
Type: pfam
Location: 37853 - 38353 (+)
Gene ID: MGYG000004780_3_39
Type: peptidase
Location: 38358 - 40406 (+)
Gene ID: MGYG000004780_3_40
Type: TC
Location: 40399 - 41550 (+)
Gene ID: MGYG000004780_3_41
Type: TC
Location: 41552 - 42211 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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