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Cluster: MGYG000004780_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004780_1 MGYG000004780_1_53 54174 55349 + GT19
TC MGYG000004780_1 MGYG000004780_1_54 55359 56897 + 2.A.66.4.1
pfam MGYG000004780_1 MGYG000004780_1_55 56989 58878 - ThiC_Rad_SAM | ThiC-associated
NULL(UNKNOWN) MGYG000004780_1 MGYG000004780_1_56 58904 59470 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004780_1 MGYG000004780_1_57 59411 60556 - 2.A.85.7.2
pfam MGYG000004780_1 MGYG000004780_1_58 60612 61304 + RNase_HII
pfam MGYG000004780_1 MGYG000004780_1_59 61361 62365 - DHO_dh
TC MGYG000004780_1 MGYG000004780_1_60 62614 64623 + 2.A.67.4.1
CAZyme MGYG000004780_1 MGYG000004780_1_61 64971 66233 - GT30
pfam MGYG000004780_1 MGYG000004780_1_62 66372 66803 - Copper-bind
TC MGYG000004780_1 MGYG000004780_1_63 66872 67636 - 3.A.1.14.19
TC MGYG000004780_1 MGYG000004780_1_64 67647 68693 - 3.A.1.14.5
STP MGYG000004780_1 MGYG000004780_1_65 68810 69925 - Peripla_BP_2
TC MGYG000004780_1 MGYG000004780_1_66 70431 72194 - 8.A.7.1.1
TC MGYG000004780_1 MGYG000004780_1_67 72194 72463 - 8.A.8.1.5
pfam MGYG000004780_1 MGYG000004780_1_68 72508 72936 - EIIA-man
STP MGYG000004780_1 MGYG000004780_1_69 72994 73557 - Pribosyltran
TC MGYG000004780_1 MGYG000004780_1_70 73666 75195 - 3.A.1.19.5
Gene ID: MGYG000004780_1_53
Type: CAZyme
Location: 54174 - 55349 (+)
Gene ID: MGYG000004780_1_54
Type: TC
Location: 55359 - 56897 (+)
Gene ID: MGYG000004780_1_55
Type: pfam
Location: 56989 - 58878 (-)
Gene ID: MGYG000004780_1_56
Type:
Location: 58904 - 59470 (+)
Gene ID: MGYG000004780_1_57
Type: TC
Location: 59411 - 60556 (-)
Gene ID: MGYG000004780_1_58
Type: pfam
Location: 60612 - 61304 (+)
Gene ID: MGYG000004780_1_59
Type: pfam
Location: 61361 - 62365 (-)
Gene ID: MGYG000004780_1_60
Type: TC
Location: 62614 - 64623 (+)
Gene ID: MGYG000004780_1_61
Type: CAZyme
Location: 64971 - 66233 (-)
Gene ID: MGYG000004780_1_62
Type: pfam
Location: 66372 - 66803 (-)
Gene ID: MGYG000004780_1_63
Type: TC
Location: 66872 - 67636 (-)
Gene ID: MGYG000004780_1_64
Type: TC
Location: 67647 - 68693 (-)
Gene ID: MGYG000004780_1_65
Type: STP
Location: 68810 - 69925 (-)
Gene ID: MGYG000004780_1_66
Type: TC
Location: 70431 - 72194 (-)
Gene ID: MGYG000004780_1_67
Type: TC
Location: 72194 - 72463 (-)
Gene ID: MGYG000004780_1_68
Type: pfam
Location: 72508 - 72936 (-)
Gene ID: MGYG000004780_1_69
Type: STP
Location: 72994 - 73557 (-)
Gene ID: MGYG000004780_1_70
Type: TC
Location: 73666 - 75195 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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