Cluster: MGYG000004773_CGC16
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004773
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004773_54 | MGYG000004773_54_2 | 1900 | 3591 | - | GH36 |
| pfam | MGYG000004773_54 | MGYG000004773_54_3 | 3588 | 4049 | - | LMWPc |
| TC | MGYG000004773_54 | MGYG000004773_54_4 | 4214 | 5758 | - | 3.A.3.31.1 |
| pfam | MGYG000004773_54 | MGYG000004773_54_5 | 5938 | 7377 | - | Flg_bb_rod | Flg_bbr_C | FlgE_D2 | LlgE_F_G_D1 |
| TC | MGYG000004773_54 | MGYG000004773_54_6 | 7736 | 8470 | - | 3.D.6.1.4 |
| pfam | MGYG000004773_54 | MGYG000004773_54_7 | 8484 | 9524 | - | FMN_bind |
| TC | MGYG000004773_54 | MGYG000004773_54_8 | 9524 | 10714 | - | 3.D.6.1.4 |
| TC | MGYG000004773_54 | MGYG000004773_54_9 | 10723 | 12690 | - | 3.D.6.1.4 |
| STP | MGYG000004773_54 | MGYG000004773_54_10 | 12693 | 13262 | - | FeS | Fer4 | Fer4 |
| TC | MGYG000004773_54 | MGYG000004773_54_11 | 13259 | 13846 | - | 3.D.6.1.4 |
| STP | MGYG000004773_54 | MGYG000004773_54_12 | 13998 | 14603 | + | HhH-GPD |
| TC | MGYG000004773_54 | MGYG000004773_54_13 | 14695 | 15255 | - | 2.A.37.1.1 |
Gene ID: MGYG000004773_54_2
Type: CAZyme
Location: 1900 - 3591 (-)
Type: CAZyme
Location: 1900 - 3591 (-)
Gene ID: MGYG000004773_54_3
Type: pfam
Location: 3588 - 4049 (-)
Type: pfam
Location: 3588 - 4049 (-)
Gene ID: MGYG000004773_54_4
Type: TC
Location: 4214 - 5758 (-)
Type: TC
Location: 4214 - 5758 (-)
Gene ID: MGYG000004773_54_5
Type: pfam
Location: 5938 - 7377 (-)
Type: pfam
Location: 5938 - 7377 (-)
Gene ID: MGYG000004773_54_6
Type: TC
Location: 7736 - 8470 (-)
Type: TC
Location: 7736 - 8470 (-)
Gene ID: MGYG000004773_54_7
Type: pfam
Location: 8484 - 9524 (-)
Type: pfam
Location: 8484 - 9524 (-)
Gene ID: MGYG000004773_54_8
Type: TC
Location: 9524 - 10714 (-)
Type: TC
Location: 9524 - 10714 (-)
Gene ID: MGYG000004773_54_9
Type: TC
Location: 10723 - 12690 (-)
Type: TC
Location: 10723 - 12690 (-)
Gene ID: MGYG000004773_54_10
Type: STP
Location: 12693 - 13262 (-)
Type: STP
Location: 12693 - 13262 (-)
Gene ID: MGYG000004773_54_11
Type: TC
Location: 13259 - 13846 (-)
Type: TC
Location: 13259 - 13846 (-)
Gene ID: MGYG000004773_54_12
Type: STP
Location: 13998 - 14603 (+)
Type: STP
Location: 13998 - 14603 (+)
Gene ID: MGYG000004773_54_13
Type: TC
Location: 14695 - 15255 (-)
Type: TC
Location: 14695 - 15255 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio sp902776275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.