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Cluster: MGYG000004773_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004773_1 MGYG000004773_1_46 52368 53381 + GH33
pfam MGYG000004773_1 MGYG000004773_1_47 53411 54373 + TctC
pfam MGYG000004773_1 MGYG000004773_1_48 54391 54864 + TctB
TC MGYG000004773_1 MGYG000004773_1_49 54867 56360 + 2.A.80.1.1
pfam MGYG000004773_1 MGYG000004773_1_50 56439 57371 + DHDPS
TC MGYG000004773_1 MGYG000004773_1_51 57461 58456 + 2.A.56.1.2
TC MGYG000004773_1 MGYG000004773_1_52 58556 59848 + 2.A.56.1.6
pfam MGYG000004773_1 MGYG000004773_1_53 59859 60485 + DctQ
TC MGYG000004773_1 MGYG000004773_1_54 60611 62434 - 9.B.34.1.2
NULL(UNKNOWN) MGYG000004773_1 MGYG000004773_1_55 62879 63496 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004773_1 MGYG000004773_1_56 64250 65317 + 1.B.42.1.2
Gene ID: MGYG000004773_1_46
Type: CAZyme
Location: 52368 - 53381 (+)
Gene ID: MGYG000004773_1_47
Type: pfam
Location: 53411 - 54373 (+)
Gene ID: MGYG000004773_1_48
Type: pfam
Location: 54391 - 54864 (+)
Gene ID: MGYG000004773_1_49
Type: TC
Location: 54867 - 56360 (+)
Gene ID: MGYG000004773_1_50
Type: pfam
Location: 56439 - 57371 (+)
Gene ID: MGYG000004773_1_51
Type: TC
Location: 57461 - 58456 (+)
Gene ID: MGYG000004773_1_52
Type: TC
Location: 58556 - 59848 (+)
Gene ID: MGYG000004773_1_53
Type: pfam
Location: 59859 - 60485 (+)
Gene ID: MGYG000004773_1_54
Type: TC
Location: 60611 - 62434 (-)
Gene ID: MGYG000004773_1_55
Type:
Location: 62879 - 63496 (+)
Gene ID: MGYG000004773_1_56
Type: TC
Location: 64250 - 65317 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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