Cluster: MGYG000004767_CGC8
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000004767
- CGC Family ID: CGCFAM_01025
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004767_4 | MGYG000004767_4_14 | 17054 | 17674 | - | GH73 |
| pfam | MGYG000004767_4 | MGYG000004767_4_15 | 17690 | 18292 | - | ECF_trnsprt |
| pfam | MGYG000004767_4 | MGYG000004767_4_16 | 18466 | 18918 | - | SprT-like |
| TC | MGYG000004767_4 | MGYG000004767_4_17 | 18900 | 21563 | - | 3.A.3.2.28 |
| pfam | MGYG000004767_4 | MGYG000004767_4_18 | 21715 | 22545 | - | NAD_synthase |
| pfam | MGYG000004767_4 | MGYG000004767_4_19 | 22548 | 24023 | - | NAPRTase | NAPRTase_N | NAPRTase_C |
| CAZyme | MGYG000004767_4 | MGYG000004767_4_20 | 24117 | 24815 | - | GT32 |
| CAZyme | MGYG000004767_4 | MGYG000004767_4_21 | 24816 | 26768 | - | GT2 |
| CAZyme | MGYG000004767_4 | MGYG000004767_4_22 | 26769 | 27863 | - | GT4 |
| CAZyme | MGYG000004767_4 | MGYG000004767_4_23 | 27860 | 28600 | - | GT26 |
| TC | MGYG000004767_4 | MGYG000004767_4_24 | 28603 | 30036 | - | 2.A.66.2.16 |
Gene ID: MGYG000004767_4_14
Type: CAZyme
Location: 17054 - 17674 (-)
Type: CAZyme
Location: 17054 - 17674 (-)
Gene ID: MGYG000004767_4_15
Type: pfam
Location: 17690 - 18292 (-)
Type: pfam
Location: 17690 - 18292 (-)
Gene ID: MGYG000004767_4_16
Type: pfam
Location: 18466 - 18918 (-)
Type: pfam
Location: 18466 - 18918 (-)
Gene ID: MGYG000004767_4_17
Type: TC
Location: 18900 - 21563 (-)
Type: TC
Location: 18900 - 21563 (-)
Gene ID: MGYG000004767_4_18
Type: pfam
Location: 21715 - 22545 (-)
Type: pfam
Location: 21715 - 22545 (-)
Gene ID: MGYG000004767_4_19
Type: pfam
Location: 22548 - 24023 (-)
Type: pfam
Location: 22548 - 24023 (-)
Gene ID: MGYG000004767_4_20
Type: CAZyme
Location: 24117 - 24815 (-)
Type: CAZyme
Location: 24117 - 24815 (-)
Gene ID: MGYG000004767_4_21
Type: CAZyme
Location: 24816 - 26768 (-)
Type: CAZyme
Location: 24816 - 26768 (-)
Gene ID: MGYG000004767_4_22
Type: CAZyme
Location: 26769 - 27863 (-)
Type: CAZyme
Location: 26769 - 27863 (-)
Gene ID: MGYG000004767_4_23
Type: CAZyme
Location: 27860 - 28600 (-)
Type: CAZyme
Location: 27860 - 28600 (-)
Gene ID: MGYG000004767_4_24
Type: TC
Location: 28603 - 30036 (-)
Type: TC
Location: 28603 - 30036 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus sp905214545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.