Cluster: MGYG000004763_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004763
- CGC Family ID: CGCFAM_00170
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004763_2 | MGYG000004763_2_109 | 141074 | 141898 | - | GT5 |
| pfam | MGYG000004763_2 | MGYG000004763_2_110 | 142308 | 143162 | + | Pantoate_ligase |
| pfam | MGYG000004763_2 | MGYG000004763_2_111 | 143168 | 143518 | + | Asp_decarbox |
| TC | MGYG000004763_2 | MGYG000004763_2_112 | 143659 | 144822 | - | 3.B.1.1.2 |
| TC | MGYG000004763_2 | MGYG000004763_2_113 | 144842 | 145285 | - | 3.B.1.1.2 |
| pfam | MGYG000004763_2 | MGYG000004763_2_114 | 145330 | 146241 | - | LTD | OAD_gamma |
| TC | MGYG000004763_2 | MGYG000004763_2_115 | 146271 | 147824 | - | 3.B.1.1.2 |
Gene ID: MGYG000004763_2_109
Type: CAZyme
Location: 141074 - 141898 (-)
Type: CAZyme
Location: 141074 - 141898 (-)
Gene ID: MGYG000004763_2_110
Type: pfam
Location: 142308 - 143162 (+)
Type: pfam
Location: 142308 - 143162 (+)
Gene ID: MGYG000004763_2_111
Type: pfam
Location: 143168 - 143518 (+)
Type: pfam
Location: 143168 - 143518 (+)
Gene ID: MGYG000004763_2_112
Type: TC
Location: 143659 - 144822 (-)
Type: TC
Location: 143659 - 144822 (-)
Gene ID: MGYG000004763_2_113
Type: TC
Location: 144842 - 145285 (-)
Type: TC
Location: 144842 - 145285 (-)
Gene ID: MGYG000004763_2_114
Type: pfam
Location: 145330 - 146241 (-)
Type: pfam
Location: 145330 - 146241 (-)
Gene ID: MGYG000004763_2_115
Type: TC
Location: 146271 - 147824 (-)
Type: TC
Location: 146271 - 147824 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900291465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.