Cluster: MGYG000004763_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 10
- Substrate:
- Genome ID: MGYG000004763
- CGC Family ID: CGCFAM_00306
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004763_2 | MGYG000004763_2_11 | 13511 | 15598 | + | GH127 |
| CAZyme | MGYG000004763_2 | MGYG000004763_2_12 | 15622 | 17439 | + | GH141 |
| TC | MGYG000004763_2 | MGYG000004763_2_13 | 17469 | 18836 | + | 2.A.1.1.74 |
| CAZyme | MGYG000004763_2 | MGYG000004763_2_14 | 18820 | 20973 | + | GH78 |
| CAZyme | MGYG000004763_2 | MGYG000004763_2_15 | 21000 | 23696 | + | GH138 |
| CAZyme | MGYG000004763_2 | MGYG000004763_2_16 | 23915 | 28099 | + | CBM57 | CBM97 | GH137 | GH2 |
| CAZyme | MGYG000004763_2 | MGYG000004763_2_17 | 28148 | 31426 | + | GH2 |
| CAZyme | MGYG000004763_2 | MGYG000004763_2_18 | 31443 | 34286 | + | GH2 |
| CAZyme | MGYG000004763_2 | MGYG000004763_2_19 | 34477 | 37731 | + | GH106 |
| CAZyme | MGYG000004763_2 | MGYG000004763_2_20 | 37783 | 39243 | + | CE20 |
| pfam | MGYG000004763_2 | MGYG000004763_2_21 | 39300 | 39749 | + | DUF6078 |
| CAZyme | MGYG000004763_2 | MGYG000004763_2_22 | 40127 | 42400 | + | GH139 |
Gene ID: MGYG000004763_2_11
Type: CAZyme
Location: 13511 - 15598 (+)
Type: CAZyme
Location: 13511 - 15598 (+)
Gene ID: MGYG000004763_2_12
Type: CAZyme
Location: 15622 - 17439 (+)
Type: CAZyme
Location: 15622 - 17439 (+)
Gene ID: MGYG000004763_2_13
Type: TC
Location: 17469 - 18836 (+)
Type: TC
Location: 17469 - 18836 (+)
Gene ID: MGYG000004763_2_14
Type: CAZyme
Location: 18820 - 20973 (+)
Type: CAZyme
Location: 18820 - 20973 (+)
Gene ID: MGYG000004763_2_15
Type: CAZyme
Location: 21000 - 23696 (+)
Type: CAZyme
Location: 21000 - 23696 (+)
Gene ID: MGYG000004763_2_16
Type: CAZyme
Location: 23915 - 28099 (+)
Type: CAZyme
Location: 23915 - 28099 (+)
Gene ID: MGYG000004763_2_17
Type: CAZyme
Location: 28148 - 31426 (+)
Type: CAZyme
Location: 28148 - 31426 (+)
Gene ID: MGYG000004763_2_18
Type: CAZyme
Location: 31443 - 34286 (+)
Type: CAZyme
Location: 31443 - 34286 (+)
Gene ID: MGYG000004763_2_19
Type: CAZyme
Location: 34477 - 37731 (+)
Type: CAZyme
Location: 34477 - 37731 (+)
Gene ID: MGYG000004763_2_20
Type: CAZyme
Location: 37783 - 39243 (+)
Type: CAZyme
Location: 37783 - 39243 (+)
Gene ID: MGYG000004763_2_21
Type: pfam
Location: 39300 - 39749 (+)
Type: pfam
Location: 39300 - 39749 (+)
Gene ID: MGYG000004763_2_22
Type: CAZyme
Location: 40127 - 42400 (+)
Type: CAZyme
Location: 40127 - 42400 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900291465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.