Cluster: MGYG000004763_CGC46
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: pectin/alpha-glucan
- Genome ID: MGYG000004763
- CGC Family ID: CGCFAM_00025
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004763_55 | MGYG000004763_55_2 | 1625 | 3307 | - | 8.A.46.1.1 |
| TC | MGYG000004763_55 | MGYG000004763_55_3 | 3332 | 6358 | - | 1.B.14.6.1 |
| CAZyme | MGYG000004763_55 | MGYG000004763_55_4 | 6421 | 8595 | - | GH97 |
| CAZyme | MGYG000004763_55 | MGYG000004763_55_5 | 8634 | 10466 | - | GH13_46 |
| pfam | MGYG000004763_55 | MGYG000004763_55_6 | 10730 | 12340 | + | DUF6377 |
| TC | MGYG000004763_55 | MGYG000004763_55_7 | 12443 | 13801 | + | 2.A.2.6.2 |
Gene ID: MGYG000004763_55_2
Type: TC
Location: 1625 - 3307 (-)
Type: TC
Location: 1625 - 3307 (-)
Gene ID: MGYG000004763_55_3
Type: TC
Location: 3332 - 6358 (-)
Type: TC
Location: 3332 - 6358 (-)
Gene ID: MGYG000004763_55_4
Type: CAZyme
Location: 6421 - 8595 (-)
Type: CAZyme
Location: 6421 - 8595 (-)
Gene ID: MGYG000004763_55_5
Type: CAZyme
Location: 8634 - 10466 (-)
Type: CAZyme
Location: 8634 - 10466 (-)
Gene ID: MGYG000004763_55_6
Type: pfam
Location: 10730 - 12340 (+)
Type: pfam
Location: 10730 - 12340 (+)
Gene ID: MGYG000004763_55_7
Type: TC
Location: 12443 - 13801 (+)
Type: TC
Location: 12443 - 13801 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900291465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.