Cluster: MGYG000004763_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004763
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004763_1 | MGYG000004763_1_147 | 176513 | 177961 | - | 3.A.1.30.1 |
| pfam | MGYG000004763_1 | MGYG000004763_1_148 | 178014 | 178583 | - | RuvC |
| pfam | MGYG000004763_1 | MGYG000004763_1_149 | 178580 | 178885 | - | DUF4286 |
| CAZyme | MGYG000004763_1 | MGYG000004763_1_150 | 179110 | 180459 | - | PL42 |
| CAZyme | MGYG000004763_1 | MGYG000004763_1_151 | 180581 | 182056 | - | GH16_3 |
| CAZyme | MGYG000004763_1 | MGYG000004763_1_152 | 182070 | 182966 | - | CBM32 |
| pfam | MGYG000004763_1 | MGYG000004763_1_153 | 183096 | 184763 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000004763_1 | MGYG000004763_1_154 | 184805 | 187831 | - | 1.B.14.6.2 |
| pfam | MGYG000004763_1 | MGYG000004763_1_155 | 187869 | 189755 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000004763_1 | MGYG000004763_1_156 | 189817 | 192954 | - | 1.B.14.6.1 |
| TF | MGYG000004763_1 | MGYG000004763_1_157 | 193166 | 193939 | - | HTH_AraC |
| TC | MGYG000004763_1 | MGYG000004763_1_158 | 194470 | 195804 | - | 2.A.40.4.2 |
Gene ID: MGYG000004763_1_147
Type: TC
Location: 176513 - 177961 (-)
Type: TC
Location: 176513 - 177961 (-)
Gene ID: MGYG000004763_1_148
Type: pfam
Location: 178014 - 178583 (-)
Type: pfam
Location: 178014 - 178583 (-)
Gene ID: MGYG000004763_1_149
Type: pfam
Location: 178580 - 178885 (-)
Type: pfam
Location: 178580 - 178885 (-)
Gene ID: MGYG000004763_1_150
Type: CAZyme
Location: 179110 - 180459 (-)
Type: CAZyme
Location: 179110 - 180459 (-)
Gene ID: MGYG000004763_1_151
Type: CAZyme
Location: 180581 - 182056 (-)
Type: CAZyme
Location: 180581 - 182056 (-)
Gene ID: MGYG000004763_1_152
Type: CAZyme
Location: 182070 - 182966 (-)
Type: CAZyme
Location: 182070 - 182966 (-)
Gene ID: MGYG000004763_1_153
Type: pfam
Location: 183096 - 184763 (-)
Type: pfam
Location: 183096 - 184763 (-)
Gene ID: MGYG000004763_1_154
Type: TC
Location: 184805 - 187831 (-)
Type: TC
Location: 184805 - 187831 (-)
Gene ID: MGYG000004763_1_155
Type: pfam
Location: 187869 - 189755 (-)
Type: pfam
Location: 187869 - 189755 (-)
Gene ID: MGYG000004763_1_156
Type: TC
Location: 189817 - 192954 (-)
Type: TC
Location: 189817 - 192954 (-)
Gene ID: MGYG000004763_1_157
Type: TF
Location: 193166 - 193939 (-)
Type: TF
Location: 193166 - 193939 (-)
Gene ID: MGYG000004763_1_158
Type: TC
Location: 194470 - 195804 (-)
Type: TC
Location: 194470 - 195804 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900291465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.