Cluster: MGYG000004763_CGC37
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000004763
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004763_26 | MGYG000004763_26_12 | 11729 | 13285 | - | 2.A.16.2.2 |
| pfam | MGYG000004763_26 | MGYG000004763_26_13 | 13501 | 14529 | + | YceG |
| pfam | MGYG000004763_26 | MGYG000004763_26_14 | 14552 | 16384 | + | MutS_V | MutS_III |
| TC | MGYG000004763_26 | MGYG000004763_26_15 | 16483 | 18351 | - | 2.A.9.3.1 |
| peptidase | MGYG000004763_26 | MGYG000004763_26_16 | 18396 | 19994 | - | C26.964 |
| CAZyme | MGYG000004763_26 | MGYG000004763_26_17 | 20297 | 23188 | + | GH2 |
| CAZyme | MGYG000004763_26 | MGYG000004763_26_18 | 23747 | 25282 | - | GH28 |
| CAZyme | MGYG000004763_26 | MGYG000004763_26_19 | 25312 | 28077 | - | GH106 |
| TF | MGYG000004763_26 | MGYG000004763_26_20 | 28400 | 29416 | + | HTH_AraC |
| CAZyme | MGYG000004763_26 | MGYG000004763_26_21 | 29403 | 30740 | + | GH28 |
| CAZyme | MGYG000004763_26 | MGYG000004763_26_22 | 30800 | 32032 | + | GH105 |
| CAZyme | MGYG000004763_26 | MGYG000004763_26_23 | 32125 | 33264 | + | GH105 |
Gene ID: MGYG000004763_26_12
Type: TC
Location: 11729 - 13285 (-)
Type: TC
Location: 11729 - 13285 (-)
Gene ID: MGYG000004763_26_13
Type: pfam
Location: 13501 - 14529 (+)
Type: pfam
Location: 13501 - 14529 (+)
Gene ID: MGYG000004763_26_14
Type: pfam
Location: 14552 - 16384 (+)
Type: pfam
Location: 14552 - 16384 (+)
Gene ID: MGYG000004763_26_15
Type: TC
Location: 16483 - 18351 (-)
Type: TC
Location: 16483 - 18351 (-)
Gene ID: MGYG000004763_26_16
Type: peptidase
Location: 18396 - 19994 (-)
Type: peptidase
Location: 18396 - 19994 (-)
Gene ID: MGYG000004763_26_17
Type: CAZyme
Location: 20297 - 23188 (+)
Type: CAZyme
Location: 20297 - 23188 (+)
Gene ID: MGYG000004763_26_18
Type: CAZyme
Location: 23747 - 25282 (-)
Type: CAZyme
Location: 23747 - 25282 (-)
Gene ID: MGYG000004763_26_19
Type: CAZyme
Location: 25312 - 28077 (-)
Type: CAZyme
Location: 25312 - 28077 (-)
Gene ID: MGYG000004763_26_20
Type: TF
Location: 28400 - 29416 (+)
Type: TF
Location: 28400 - 29416 (+)
Gene ID: MGYG000004763_26_21
Type: CAZyme
Location: 29403 - 30740 (+)
Type: CAZyme
Location: 29403 - 30740 (+)
Gene ID: MGYG000004763_26_22
Type: CAZyme
Location: 30800 - 32032 (+)
Type: CAZyme
Location: 30800 - 32032 (+)
Gene ID: MGYG000004763_26_23
Type: CAZyme
Location: 32125 - 33264 (+)
Type: CAZyme
Location: 32125 - 33264 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900291465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.