Cluster: MGYG000004763_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: MGYG000004763
- CGC Family ID: CGCFAM_00001
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004763_17 | MGYG000004763_17_40 | 51052 | 52074 | + | GT94 |
| CAZyme | MGYG000004763_17 | MGYG000004763_17_41 | 52645 | 53676 | - | PL11_1 |
| CAZyme | MGYG000004763_17 | MGYG000004763_17_42 | 53705 | 54709 | - | PL11_1 |
| pfam | MGYG000004763_17 | MGYG000004763_17_43 | 54843 | 56567 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000004763_17 | MGYG000004763_17_44 | 56589 | 59636 | - | 1.B.14.6.1 |
Gene ID: MGYG000004763_17_40
Type: CAZyme
Location: 51052 - 52074 (+)
Type: CAZyme
Location: 51052 - 52074 (+)
Gene ID: MGYG000004763_17_41
Type: CAZyme
Location: 52645 - 53676 (-)
Type: CAZyme
Location: 52645 - 53676 (-)
Gene ID: MGYG000004763_17_42
Type: CAZyme
Location: 53705 - 54709 (-)
Type: CAZyme
Location: 53705 - 54709 (-)
Gene ID: MGYG000004763_17_43
Type: pfam
Location: 54843 - 56567 (-)
Type: pfam
Location: 54843 - 56567 (-)
Gene ID: MGYG000004763_17_44
Type: TC
Location: 56589 - 59636 (-)
Type: TC
Location: 56589 - 59636 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900291465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.