Cluster: MGYG000004763_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004763
- CGC Family ID: CGCFAM_00013
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004763_15 | MGYG000004763_15_37 | 57877 | 59007 | - | GT28 |
| pfam | MGYG000004763_15 | MGYG000004763_15_38 | 59161 | 60489 | - | DDE_Tnp_1 | DDE_Tnp_1_4 |
| TC | MGYG000004763_15 | MGYG000004763_15_39 | 60832 | 62106 | - | 2.A.103.1.2 |
| pfam | MGYG000004763_15 | MGYG000004763_15_40 | 62125 | 63462 | - | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | MGYG000004763_15 | MGYG000004763_15_41 | 63465 | 64733 | - | 9.B.146.1.3 |
Gene ID: MGYG000004763_15_37
Type: CAZyme
Location: 57877 - 59007 (-)
Type: CAZyme
Location: 57877 - 59007 (-)
Gene ID: MGYG000004763_15_38
Type: pfam
Location: 59161 - 60489 (-)
Type: pfam
Location: 59161 - 60489 (-)
Gene ID: MGYG000004763_15_39
Type: TC
Location: 60832 - 62106 (-)
Type: TC
Location: 60832 - 62106 (-)
Gene ID: MGYG000004763_15_40
Type: pfam
Location: 62125 - 63462 (-)
Type: pfam
Location: 62125 - 63462 (-)
Gene ID: MGYG000004763_15_41
Type: TC
Location: 63465 - 64733 (-)
Type: TC
Location: 63465 - 64733 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900291465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.