Cluster: MGYG000004763_CGC23
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000004763
- CGC Family ID: CGCFAM_09265
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004763_11 | MGYG000004763_11_47 | 47584 | 48525 | + | GH43_18 |
| CAZyme | MGYG000004763_11 | MGYG000004763_11_48 | 48575 | 51931 | + | GH142 | GH143 |
| CAZyme | MGYG000004763_11 | MGYG000004763_11_49 | 51961 | 54726 | + | CBM67 | GH78 |
| CAZyme | MGYG000004763_11 | MGYG000004763_11_50 | 54745 | 56709 | + | CE19 |
| CAZyme | MGYG000004763_11 | MGYG000004763_11_51 | 56749 | 59193 | + | GH95 |
| CAZyme | MGYG000004763_11 | MGYG000004763_11_52 | 59255 | 60697 | + | GH140 |
| CAZyme | MGYG000004763_11 | MGYG000004763_11_53 | 60701 | 64552 | + | CBM67 | GH33 | GH78 |
| NULL(UNKNOWN) | MGYG000004763_11 | MGYG000004763_11_54 | 64782 | 65015 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004763_11 | MGYG000004763_11_55 | 65127 | 66362 | + | 2.A.6.2.29 |
| TC | MGYG000004763_11 | MGYG000004763_11_56 | 66375 | 69521 | + | 2.A.6.2.22 |
| TC | MGYG000004763_11 | MGYG000004763_11_57 | 69527 | 70906 | + | 2.A.6.2.20 |
| pfam | MGYG000004763_11 | MGYG000004763_11_58 | 70987 | 71799 | + | Metallophos |
| CAZyme | MGYG000004763_11 | MGYG000004763_11_59 | 71796 | 72917 | + | GT1 |
Gene ID: MGYG000004763_11_47
Type: CAZyme
Location: 47584 - 48525 (+)
Type: CAZyme
Location: 47584 - 48525 (+)
Gene ID: MGYG000004763_11_48
Type: CAZyme
Location: 48575 - 51931 (+)
Type: CAZyme
Location: 48575 - 51931 (+)
Gene ID: MGYG000004763_11_49
Type: CAZyme
Location: 51961 - 54726 (+)
Type: CAZyme
Location: 51961 - 54726 (+)
Gene ID: MGYG000004763_11_50
Type: CAZyme
Location: 54745 - 56709 (+)
Type: CAZyme
Location: 54745 - 56709 (+)
Gene ID: MGYG000004763_11_51
Type: CAZyme
Location: 56749 - 59193 (+)
Type: CAZyme
Location: 56749 - 59193 (+)
Gene ID: MGYG000004763_11_52
Type: CAZyme
Location: 59255 - 60697 (+)
Type: CAZyme
Location: 59255 - 60697 (+)
Gene ID: MGYG000004763_11_53
Type: CAZyme
Location: 60701 - 64552 (+)
Type: CAZyme
Location: 60701 - 64552 (+)
Gene ID: MGYG000004763_11_54
Type:
Location: 64782 - 65015 (-)
Type:
Location: 64782 - 65015 (-)
Gene ID: MGYG000004763_11_55
Type: TC
Location: 65127 - 66362 (+)
Type: TC
Location: 65127 - 66362 (+)
Gene ID: MGYG000004763_11_56
Type: TC
Location: 66375 - 69521 (+)
Type: TC
Location: 66375 - 69521 (+)
Gene ID: MGYG000004763_11_57
Type: TC
Location: 69527 - 70906 (+)
Type: TC
Location: 69527 - 70906 (+)
Gene ID: MGYG000004763_11_58
Type: pfam
Location: 70987 - 71799 (+)
Type: pfam
Location: 70987 - 71799 (+)
Gene ID: MGYG000004763_11_59
Type: CAZyme
Location: 71796 - 72917 (+)
Type: CAZyme
Location: 71796 - 72917 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900291465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.