Cluster: MGYG000004763_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004763
- CGC Family ID: CGCFAM_01273
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004763_3 | MGYG000004763_3_110 | 120380 | 122797 | + | GT2 |
| pfam | MGYG000004763_3 | MGYG000004763_3_111 | 122794 | 124089 | + | SpoIID |
| TC | MGYG000004763_3 | MGYG000004763_3_112 | 124091 | 125368 | + | 2.A.1.25.5 |
| TC | MGYG000004763_3 | MGYG000004763_3_113 | 125663 | 127162 | + | 4.C.1.1.7 |
| pfam | MGYG000004763_3 | MGYG000004763_3_114 | 127220 | 127468 | + | PP-binding |
| TC | MGYG000004763_3 | MGYG000004763_3_115 | 127472 | 128863 | + | 2.A.50.2.1 |
Gene ID: MGYG000004763_3_110
Type: CAZyme
Location: 120380 - 122797 (+)
Type: CAZyme
Location: 120380 - 122797 (+)
Gene ID: MGYG000004763_3_111
Type: pfam
Location: 122794 - 124089 (+)
Type: pfam
Location: 122794 - 124089 (+)
Gene ID: MGYG000004763_3_112
Type: TC
Location: 124091 - 125368 (+)
Type: TC
Location: 124091 - 125368 (+)
Gene ID: MGYG000004763_3_113
Type: TC
Location: 125663 - 127162 (+)
Type: TC
Location: 125663 - 127162 (+)
Gene ID: MGYG000004763_3_114
Type: pfam
Location: 127220 - 127468 (+)
Type: pfam
Location: 127220 - 127468 (+)
Gene ID: MGYG000004763_3_115
Type: TC
Location: 127472 - 128863 (+)
Type: TC
Location: 127472 - 128863 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900291465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.