Cluster: MGYG000004748_CGC61
🧬 Cluster Details
- Gene Count: 28
- CAZyme Count: 11
- Substrate: pectin
- Genome ID: MGYG000004748
- CGC Family ID: CGCFAM_00298
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004748_21 | MGYG000004748_21_2 | 83 | 3073 | - | GH2 |
| pfam | MGYG000004748_21 | MGYG000004748_21_3 | 3090 | 4667 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000004748_21 | MGYG000004748_21_4 | 4682 | 7783 | - | 1.B.14.6.1 |
| pfam | MGYG000004748_21 | MGYG000004748_21_5 | 8032 | 8940 | + | SASA |
| NULL(UNKNOWN) | MGYG000004748_21 | MGYG000004748_21_6 | 9098 | 9874 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004748_21 | MGYG000004748_21_7 | 9903 | 11183 | - | CE12 |
| pfam | MGYG000004748_21 | MGYG000004748_21_8 | 11194 | 12870 | - | Mfa_like_1 |
| CAZyme | MGYG000004748_21 | MGYG000004748_21_9 | 13118 | 15031 | + | PL11_1 |
| CAZyme | MGYG000004748_21 | MGYG000004748_21_10 | 15044 | 16615 | + | PL9_1 |
| NULL(UNKNOWN) | MGYG000004748_21 | MGYG000004748_21_11 | 16643 | 17056 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000004748_21 | MGYG000004748_21_12 | 17091 | 21413 | - | HTH_AraC |
| CAZyme | MGYG000004748_21 | MGYG000004748_21_13 | 21499 | 22458 | - | CE4 |
| NULL(UNKNOWN) | MGYG000004748_21 | MGYG000004748_21_14 | 22554 | 25805 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000004748_21 | MGYG000004748_21_15 | 25985 | 28096 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004748_21 | MGYG000004748_21_16 | 28277 | 31135 | - | GH2 |
| CAZyme | MGYG000004748_21 | MGYG000004748_21_17 | 31242 | 32618 | - | PL1_2 |
| sulfatase | MGYG000004748_21 | MGYG000004748_21_18 | 32737 | 34731 | - | S1_27 |
| TC | MGYG000004748_21 | MGYG000004748_21_19 | 34745 | 37987 | - | 1.B.14.6.1 |
| TF | MGYG000004748_21 | MGYG000004748_21_20 | 38229 | 39155 | - | HTH_AraC |
| CAZyme | MGYG000004748_21 | MGYG000004748_21_21 | 39301 | 40626 | - | GH105 |
| pfam | MGYG000004748_21 | MGYG000004748_21_22 | 40648 | 41793 | - | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| pfam | MGYG000004748_21 | MGYG000004748_21_23 | 41818 | 42627 | - | Aldolase_II |
| TC | MGYG000004748_21 | MGYG000004748_21_24 | 42677 | 43708 | - | 2.A.7.6.1 |
| pfam | MGYG000004748_21 | MGYG000004748_21_25 | 43794 | 45047 | - | RhaA |
| pfam | MGYG000004748_21 | MGYG000004748_21_26 | 45094 | 46560 | - | FGGY_N | FGGY_C |
| CAZyme | MGYG000004748_21 | MGYG000004748_21_27 | 46677 | 48209 | - | GH28 |
| CAZyme | MGYG000004748_21 | MGYG000004748_21_28 | 48250 | 51030 | - | GH106 |
| CAZyme | MGYG000004748_21 | MGYG000004748_21_29 | 51033 | 53561 | - | CE20 | GH105 |
Gene ID: MGYG000004748_21_2
Type: CAZyme
Location: 83 - 3073 (-)
Type: CAZyme
Location: 83 - 3073 (-)
Gene ID: MGYG000004748_21_3
Type: pfam
Location: 3090 - 4667 (-)
Type: pfam
Location: 3090 - 4667 (-)
Gene ID: MGYG000004748_21_4
Type: TC
Location: 4682 - 7783 (-)
Type: TC
Location: 4682 - 7783 (-)
Gene ID: MGYG000004748_21_5
Type: pfam
Location: 8032 - 8940 (+)
Type: pfam
Location: 8032 - 8940 (+)
Gene ID: MGYG000004748_21_6
Type:
Location: 9098 - 9874 (-)
Type:
Location: 9098 - 9874 (-)
Gene ID: MGYG000004748_21_7
Type: CAZyme
Location: 9903 - 11183 (-)
Type: CAZyme
Location: 9903 - 11183 (-)
Gene ID: MGYG000004748_21_8
Type: pfam
Location: 11194 - 12870 (-)
Type: pfam
Location: 11194 - 12870 (-)
Gene ID: MGYG000004748_21_9
Type: CAZyme
Location: 13118 - 15031 (+)
Type: CAZyme
Location: 13118 - 15031 (+)
Gene ID: MGYG000004748_21_10
Type: CAZyme
Location: 15044 - 16615 (+)
Type: CAZyme
Location: 15044 - 16615 (+)
Gene ID: MGYG000004748_21_11
Type:
Location: 16643 - 17056 (+)
Type:
Location: 16643 - 17056 (+)
Gene ID: MGYG000004748_21_12
Type: TF
Location: 17091 - 21413 (-)
Type: TF
Location: 17091 - 21413 (-)
Gene ID: MGYG000004748_21_13
Type: CAZyme
Location: 21499 - 22458 (-)
Type: CAZyme
Location: 21499 - 22458 (-)
Gene ID: MGYG000004748_21_14
Type:
Location: 22554 - 25805 (-)
Type:
Location: 22554 - 25805 (-)
Gene ID: MGYG000004748_21_15
Type:
Location: 25985 - 28096 (-)
Type:
Location: 25985 - 28096 (-)
Gene ID: MGYG000004748_21_16
Type: CAZyme
Location: 28277 - 31135 (-)
Type: CAZyme
Location: 28277 - 31135 (-)
Gene ID: MGYG000004748_21_17
Type: CAZyme
Location: 31242 - 32618 (-)
Type: CAZyme
Location: 31242 - 32618 (-)
Gene ID: MGYG000004748_21_18
Type: sulfatase
Location: 32737 - 34731 (-)
Type: sulfatase
Location: 32737 - 34731 (-)
Gene ID: MGYG000004748_21_19
Type: TC
Location: 34745 - 37987 (-)
Type: TC
Location: 34745 - 37987 (-)
Gene ID: MGYG000004748_21_20
Type: TF
Location: 38229 - 39155 (-)
Type: TF
Location: 38229 - 39155 (-)
Gene ID: MGYG000004748_21_21
Type: CAZyme
Location: 39301 - 40626 (-)
Type: CAZyme
Location: 39301 - 40626 (-)
Gene ID: MGYG000004748_21_22
Type: pfam
Location: 40648 - 41793 (-)
Type: pfam
Location: 40648 - 41793 (-)
Gene ID: MGYG000004748_21_23
Type: pfam
Location: 41818 - 42627 (-)
Type: pfam
Location: 41818 - 42627 (-)
Gene ID: MGYG000004748_21_24
Type: TC
Location: 42677 - 43708 (-)
Type: TC
Location: 42677 - 43708 (-)
Gene ID: MGYG000004748_21_25
Type: pfam
Location: 43794 - 45047 (-)
Type: pfam
Location: 43794 - 45047 (-)
Gene ID: MGYG000004748_21_26
Type: pfam
Location: 45094 - 46560 (-)
Type: pfam
Location: 45094 - 46560 (-)
Gene ID: MGYG000004748_21_27
Type: CAZyme
Location: 46677 - 48209 (-)
Type: CAZyme
Location: 46677 - 48209 (-)
Gene ID: MGYG000004748_21_28
Type: CAZyme
Location: 48250 - 51030 (-)
Type: CAZyme
Location: 48250 - 51030 (-)
Gene ID: MGYG000004748_21_29
Type: CAZyme
Location: 51033 - 53561 (-)
Type: CAZyme
Location: 51033 - 53561 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp905215345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.