Cluster: MGYG000004748_CGC58
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000004748
- CGC Family ID: CGCFAM_00676
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004748_19 | MGYG000004748_19_1 | 80 | 1219 | - | CE19 |
| TC | MGYG000004748_19 | MGYG000004748_19_2 | 1239 | 2771 | - | 8.A.46.1.4 |
| TC | MGYG000004748_19 | MGYG000004748_19_3 | 2793 | 5786 | - | 1.B.14.6.1 |
| CAZyme | MGYG000004748_19 | MGYG000004748_19_4 | 6085 | 7398 | - | CE7 |
| CAZyme | MGYG000004748_19 | MGYG000004748_19_5 | 7445 | 9211 | - | CE12 | CE8 |
| STP | MGYG000004748_19 | MGYG000004748_19_6 | 9356 | 9703 | + | AraC_binding |
| CAZyme | MGYG000004748_19 | MGYG000004748_19_7 | 9831 | 10793 | - | CE8 |
| CAZyme | MGYG000004748_19 | MGYG000004748_19_8 | 11187 | 12407 | - | GH105 |
| TC | MGYG000004748_19 | MGYG000004748_19_9 | 12700 | 14106 | + | 4.A.5.1.4 |
| pfam | MGYG000004748_19 | MGYG000004748_19_10 | 14134 | 15090 | + | KduI |
| TC | MGYG000004748_19 | MGYG000004748_19_11 | 15223 | 16665 | + | 2.A.1.14.25 |
| pfam | MGYG000004748_19 | MGYG000004748_19_12 | 17105 | 20587 | - | AAA_11 | AAA_11 | AAA_12 | AAA_19 | AAA_30 |
| TC | MGYG000004748_19 | MGYG000004748_19_13 | 20595 | 21416 | - | 2.A.64.1.3 |
Gene ID: MGYG000004748_19_1
Type: CAZyme
Location: 80 - 1219 (-)
Type: CAZyme
Location: 80 - 1219 (-)
Gene ID: MGYG000004748_19_2
Type: TC
Location: 1239 - 2771 (-)
Type: TC
Location: 1239 - 2771 (-)
Gene ID: MGYG000004748_19_3
Type: TC
Location: 2793 - 5786 (-)
Type: TC
Location: 2793 - 5786 (-)
Gene ID: MGYG000004748_19_4
Type: CAZyme
Location: 6085 - 7398 (-)
Type: CAZyme
Location: 6085 - 7398 (-)
Gene ID: MGYG000004748_19_5
Type: CAZyme
Location: 7445 - 9211 (-)
Type: CAZyme
Location: 7445 - 9211 (-)
Gene ID: MGYG000004748_19_6
Type: STP
Location: 9356 - 9703 (+)
Type: STP
Location: 9356 - 9703 (+)
Gene ID: MGYG000004748_19_7
Type: CAZyme
Location: 9831 - 10793 (-)
Type: CAZyme
Location: 9831 - 10793 (-)
Gene ID: MGYG000004748_19_8
Type: CAZyme
Location: 11187 - 12407 (-)
Type: CAZyme
Location: 11187 - 12407 (-)
Gene ID: MGYG000004748_19_9
Type: TC
Location: 12700 - 14106 (+)
Type: TC
Location: 12700 - 14106 (+)
Gene ID: MGYG000004748_19_10
Type: pfam
Location: 14134 - 15090 (+)
Type: pfam
Location: 14134 - 15090 (+)
Gene ID: MGYG000004748_19_11
Type: TC
Location: 15223 - 16665 (+)
Type: TC
Location: 15223 - 16665 (+)
Gene ID: MGYG000004748_19_12
Type: pfam
Location: 17105 - 20587 (-)
Type: pfam
Location: 17105 - 20587 (-)
Gene ID: MGYG000004748_19_13
Type: TC
Location: 20595 - 21416 (-)
Type: TC
Location: 20595 - 21416 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp905215345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.