Cluster: MGYG000004748_CGC45
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate: xylan
- Genome ID: MGYG000004748
- CGC Family ID: CGCFAM_00239
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004748_9 | MGYG000004748_9_38 | 42077 | 43471 | - | 9.B.196.1.2 |
| CAZyme | MGYG000004748_9 | MGYG000004748_9_39 | 43822 | 45831 | + | PL12_2 |
| CAZyme | MGYG000004748_9 | MGYG000004748_9_40 | 45897 | 47165 | + | GH88 |
| pfam | MGYG000004748_9 | MGYG000004748_9_41 | 47248 | 48264 | - | OTCace | OTCace_N |
| CAZyme | MGYG000004748_9 | MGYG000004748_9_42 | 48513 | 49646 | + | CE1 |
| CAZyme | MGYG000004748_9 | MGYG000004748_9_43 | 49666 | 50835 | + | CE1 |
| TF | MGYG000004748_9 | MGYG000004748_9_44 | 51065 | 54847 | + | HTH_AraC |
| pfam | MGYG000004748_9 | MGYG000004748_9_45 | 55160 | 56959 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000004748_9 | MGYG000004748_9_46 | 56978 | 60157 | - | 1.B.14.6.1 |
| CAZyme | MGYG000004748_9 | MGYG000004748_9_47 | 60190 | 61197 | - | GH43_29 |
| CAZyme | MGYG000004748_9 | MGYG000004748_9_48 | 61249 | 62781 | - | GH51_1 |
| CAZyme | MGYG000004748_9 | MGYG000004748_9_49 | 62818 | 65346 | - | GH9 |
Gene ID: MGYG000004748_9_38
Type: TC
Location: 42077 - 43471 (-)
Type: TC
Location: 42077 - 43471 (-)
Gene ID: MGYG000004748_9_39
Type: CAZyme
Location: 43822 - 45831 (+)
Type: CAZyme
Location: 43822 - 45831 (+)
Gene ID: MGYG000004748_9_40
Type: CAZyme
Location: 45897 - 47165 (+)
Type: CAZyme
Location: 45897 - 47165 (+)
Gene ID: MGYG000004748_9_41
Type: pfam
Location: 47248 - 48264 (-)
Type: pfam
Location: 47248 - 48264 (-)
Gene ID: MGYG000004748_9_42
Type: CAZyme
Location: 48513 - 49646 (+)
Type: CAZyme
Location: 48513 - 49646 (+)
Gene ID: MGYG000004748_9_43
Type: CAZyme
Location: 49666 - 50835 (+)
Type: CAZyme
Location: 49666 - 50835 (+)
Gene ID: MGYG000004748_9_44
Type: TF
Location: 51065 - 54847 (+)
Type: TF
Location: 51065 - 54847 (+)
Gene ID: MGYG000004748_9_45
Type: pfam
Location: 55160 - 56959 (-)
Type: pfam
Location: 55160 - 56959 (-)
Gene ID: MGYG000004748_9_46
Type: TC
Location: 56978 - 60157 (-)
Type: TC
Location: 56978 - 60157 (-)
Gene ID: MGYG000004748_9_47
Type: CAZyme
Location: 60190 - 61197 (-)
Type: CAZyme
Location: 60190 - 61197 (-)
Gene ID: MGYG000004748_9_48
Type: CAZyme
Location: 61249 - 62781 (-)
Type: CAZyme
Location: 61249 - 62781 (-)
Gene ID: MGYG000004748_9_49
Type: CAZyme
Location: 62818 - 65346 (-)
Type: CAZyme
Location: 62818 - 65346 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp905215345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.