Cluster: MGYG000004748_CGC40
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004748
- CGC Family ID: CGCFAM_05924
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004748_8 | MGYG000004748_8_14 | 15743 | 17794 | - | 3.A.11.1.1 |
| pfam | MGYG000004748_8 | MGYG000004748_8_15 | 17848 | 18498 | - | Ribul_P_3_epim |
| TF | MGYG000004748_8 | MGYG000004748_8_16 | 18580 | 19344 | - | LytTR |
| TC | MGYG000004748_8 | MGYG000004748_8_17 | 19350 | 20426 | - | 9.B.33.1.1 |
| pfam | MGYG000004748_8 | MGYG000004748_8_18 | 20455 | 21357 | - | HlyD_3 | HlyD_D23 |
| TC | MGYG000004748_8 | MGYG000004748_8_19 | 21372 | 25703 | - | 2.A.6.1.13 |
| pfam | MGYG000004748_8 | MGYG000004748_8_20 | 25823 | 26791 | - | Formyl_trans_N | Formyl_trans_C |
| TC | MGYG000004748_8 | MGYG000004748_8_21 | 26812 | 28602 | - | 2.A.49.6.1 |
| pfam | MGYG000004748_8 | MGYG000004748_8_22 | 28608 | 29138 | - | Sua5_yciO_yrdC |
| CAZyme | MGYG000004748_8 | MGYG000004748_8_23 | 29718 | 31076 | - | CBM6 | GH43_29 |
| CAZyme | MGYG000004748_8 | MGYG000004748_8_24 | 31093 | 34227 | - | GH2 |
| sulfatase | MGYG000004748_8 | MGYG000004748_8_25 | 34251 | 35267 | - | S1_16 |
| TC | MGYG000004748_8 | MGYG000004748_8_26 | 35302 | 36561 | - | 2.A.1.7.1 |
Gene ID: MGYG000004748_8_14
Type: TC
Location: 15743 - 17794 (-)
Type: TC
Location: 15743 - 17794 (-)
Gene ID: MGYG000004748_8_15
Type: pfam
Location: 17848 - 18498 (-)
Type: pfam
Location: 17848 - 18498 (-)
Gene ID: MGYG000004748_8_16
Type: TF
Location: 18580 - 19344 (-)
Type: TF
Location: 18580 - 19344 (-)
Gene ID: MGYG000004748_8_17
Type: TC
Location: 19350 - 20426 (-)
Type: TC
Location: 19350 - 20426 (-)
Gene ID: MGYG000004748_8_18
Type: pfam
Location: 20455 - 21357 (-)
Type: pfam
Location: 20455 - 21357 (-)
Gene ID: MGYG000004748_8_19
Type: TC
Location: 21372 - 25703 (-)
Type: TC
Location: 21372 - 25703 (-)
Gene ID: MGYG000004748_8_20
Type: pfam
Location: 25823 - 26791 (-)
Type: pfam
Location: 25823 - 26791 (-)
Gene ID: MGYG000004748_8_21
Type: TC
Location: 26812 - 28602 (-)
Type: TC
Location: 26812 - 28602 (-)
Gene ID: MGYG000004748_8_22
Type: pfam
Location: 28608 - 29138 (-)
Type: pfam
Location: 28608 - 29138 (-)
Gene ID: MGYG000004748_8_23
Type: CAZyme
Location: 29718 - 31076 (-)
Type: CAZyme
Location: 29718 - 31076 (-)
Gene ID: MGYG000004748_8_24
Type: CAZyme
Location: 31093 - 34227 (-)
Type: CAZyme
Location: 31093 - 34227 (-)
Gene ID: MGYG000004748_8_25
Type: sulfatase
Location: 34251 - 35267 (-)
Type: sulfatase
Location: 34251 - 35267 (-)
Gene ID: MGYG000004748_8_26
Type: TC
Location: 35302 - 36561 (-)
Type: TC
Location: 35302 - 36561 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp905215345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.