Cluster: MGYG000004748_CGC4
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 9
- Substrate:
- Genome ID: MGYG000004748
- CGC Family ID: CGCFAM_01055
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004748_1 | MGYG000004748_1_196 | 243275 | 246436 | + | 1.B.14.6.1 |
| TC | MGYG000004748_1 | MGYG000004748_1_197 | 246458 | 248263 | + | 8.A.46.1.3 |
| NULL(UNKNOWN) | MGYG000004748_1 | MGYG000004748_1_198 | 248431 | 250893 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004748_1 | MGYG000004748_1_199 | 251120 | 252595 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000004748_1 | MGYG000004748_1_200 | 252610 | 255726 | - | 1.B.14.6.1 |
| CAZyme | MGYG000004748_1 | MGYG000004748_1_201 | 255982 | 257541 | - | PL29 |
| CAZyme | MGYG000004748_1 | MGYG000004748_1_202 | 257548 | 259824 | - | GH95 |
| CAZyme | MGYG000004748_1 | MGYG000004748_1_203 | 259935 | 262100 | - | PL8_3 |
| CAZyme | MGYG000004748_1 | MGYG000004748_1_204 | 262097 | 263401 | - | GH105 |
| CAZyme | MGYG000004748_1 | MGYG000004748_1_205 | 263427 | 264575 | - | PL38 |
| CAZyme | MGYG000004748_1 | MGYG000004748_1_206 | 264595 | 267042 | - | GH2 |
| CAZyme | MGYG000004748_1 | MGYG000004748_1_207 | 267061 | 268287 | - | GH88 |
| CAZyme | MGYG000004748_1 | MGYG000004748_1_208 | 268309 | 270309 | - | GH105 |
| TF | MGYG000004748_1 | MGYG000004748_1_209 | 270423 | 274514 | - | 0035607 |
| CAZyme | MGYG000004748_1 | MGYG000004748_1_210 | 274673 | 275809 | - | GH105 |
| TC | MGYG000004748_1 | MGYG000004748_1_211 | 276190 | 278589 | - | 9.B.14.3.1 |
Gene ID: MGYG000004748_1_196
Type: TC
Location: 243275 - 246436 (+)
Type: TC
Location: 243275 - 246436 (+)
Gene ID: MGYG000004748_1_197
Type: TC
Location: 246458 - 248263 (+)
Type: TC
Location: 246458 - 248263 (+)
Gene ID: MGYG000004748_1_198
Type:
Location: 248431 - 250893 (+)
Type:
Location: 248431 - 250893 (+)
Gene ID: MGYG000004748_1_199
Type: pfam
Location: 251120 - 252595 (-)
Type: pfam
Location: 251120 - 252595 (-)
Gene ID: MGYG000004748_1_200
Type: TC
Location: 252610 - 255726 (-)
Type: TC
Location: 252610 - 255726 (-)
Gene ID: MGYG000004748_1_201
Type: CAZyme
Location: 255982 - 257541 (-)
Type: CAZyme
Location: 255982 - 257541 (-)
Gene ID: MGYG000004748_1_202
Type: CAZyme
Location: 257548 - 259824 (-)
Type: CAZyme
Location: 257548 - 259824 (-)
Gene ID: MGYG000004748_1_203
Type: CAZyme
Location: 259935 - 262100 (-)
Type: CAZyme
Location: 259935 - 262100 (-)
Gene ID: MGYG000004748_1_204
Type: CAZyme
Location: 262097 - 263401 (-)
Type: CAZyme
Location: 262097 - 263401 (-)
Gene ID: MGYG000004748_1_205
Type: CAZyme
Location: 263427 - 264575 (-)
Type: CAZyme
Location: 263427 - 264575 (-)
Gene ID: MGYG000004748_1_206
Type: CAZyme
Location: 264595 - 267042 (-)
Type: CAZyme
Location: 264595 - 267042 (-)
Gene ID: MGYG000004748_1_207
Type: CAZyme
Location: 267061 - 268287 (-)
Type: CAZyme
Location: 267061 - 268287 (-)
Gene ID: MGYG000004748_1_208
Type: CAZyme
Location: 268309 - 270309 (-)
Type: CAZyme
Location: 268309 - 270309 (-)
Gene ID: MGYG000004748_1_209
Type: TF
Location: 270423 - 274514 (-)
Type: TF
Location: 270423 - 274514 (-)
Gene ID: MGYG000004748_1_210
Type: CAZyme
Location: 274673 - 275809 (-)
Type: CAZyme
Location: 274673 - 275809 (-)
Gene ID: MGYG000004748_1_211
Type: TC
Location: 276190 - 278589 (-)
Type: TC
Location: 276190 - 278589 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp905215345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.