Cluster: MGYG000004746_CGC4
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004746
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004746_4 | MGYG000004746_4_75 | 79237 | 80004 | - | 3.A.1.103.1 |
| TC | MGYG000004746_4 | MGYG000004746_4_76 | 80016 | 80861 | - | 3.A.1.103.6 |
| CAZyme | MGYG000004746_4 | MGYG000004746_4_77 | 81008 | 81961 | + | GT2 |
| pfam | MGYG000004746_4 | MGYG000004746_4_78 | 81968 | 83053 | + | Acyl_transf_3 |
| CAZyme | MGYG000004746_4 | MGYG000004746_4_79 | 83187 | 84365 | - | GT2 |
| CAZyme | MGYG000004746_4 | MGYG000004746_4_80 | 84367 | 85482 | - | GT2 |
| pfam | MGYG000004746_4 | MGYG000004746_4_81 | 85708 | 86745 | + | Acyl_transf_3 |
| pfam | MGYG000004746_4 | MGYG000004746_4_82 | 86779 | 88821 | - | DUF6541 |
| CAZyme | MGYG000004746_4 | MGYG000004746_4_83 | 89368 | 90060 | - | GT2 |
Gene ID: MGYG000004746_4_75
Type: TC
Location: 79237 - 80004 (-)
Type: TC
Location: 79237 - 80004 (-)
Gene ID: MGYG000004746_4_76
Type: TC
Location: 80016 - 80861 (-)
Type: TC
Location: 80016 - 80861 (-)
Gene ID: MGYG000004746_4_77
Type: CAZyme
Location: 81008 - 81961 (+)
Type: CAZyme
Location: 81008 - 81961 (+)
Gene ID: MGYG000004746_4_78
Type: pfam
Location: 81968 - 83053 (+)
Type: pfam
Location: 81968 - 83053 (+)
Gene ID: MGYG000004746_4_79
Type: CAZyme
Location: 83187 - 84365 (-)
Type: CAZyme
Location: 83187 - 84365 (-)
Gene ID: MGYG000004746_4_80
Type: CAZyme
Location: 84367 - 85482 (-)
Type: CAZyme
Location: 84367 - 85482 (-)
Gene ID: MGYG000004746_4_81
Type: pfam
Location: 85708 - 86745 (+)
Type: pfam
Location: 85708 - 86745 (+)
Gene ID: MGYG000004746_4_82
Type: pfam
Location: 86779 - 88821 (-)
Type: pfam
Location: 86779 - 88821 (-)
Gene ID: MGYG000004746_4_83
Type: CAZyme
Location: 89368 - 90060 (-)
Type: CAZyme
Location: 89368 - 90060 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905212545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.