Cluster: MGYG000004735_CGC22
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: MGYG000004735
- CGC Family ID: CGCFAM_00010
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004735_17 | MGYG000004735_17_26 | 17363 | 18856 | + | 2.A.50.2.1 |
| TC | MGYG000004735_17 | MGYG000004735_17_27 | 19139 | 20452 | + | 3.A.1.1.45 |
| TC | MGYG000004735_17 | MGYG000004735_17_28 | 20593 | 21444 | + | 3.A.1.1.45 |
| TC | MGYG000004735_17 | MGYG000004735_17_29 | 21444 | 22283 | + | 3.A.1.1.45 |
| CAZyme | MGYG000004735_17 | MGYG000004735_17_30 | 22326 | 23813 | + | GH77 |
| TF | MGYG000004735_17 | MGYG000004735_17_31 | 24018 | 25040 | + | LacI |
| TC | MGYG000004735_17 | MGYG000004735_17_32 | 25077 | 25949 | + | 3.A.1.26.7 |
| TC | MGYG000004735_17 | MGYG000004735_17_33 | 25939 | 26787 | + | 3.A.1.26.7 |
| TC | MGYG000004735_17 | MGYG000004735_17_34 | 26866 | 27684 | + | 3.A.1.25.4 |
Gene ID: MGYG000004735_17_26
Type: TC
Location: 17363 - 18856 (+)
Type: TC
Location: 17363 - 18856 (+)
Gene ID: MGYG000004735_17_27
Type: TC
Location: 19139 - 20452 (+)
Type: TC
Location: 19139 - 20452 (+)
Gene ID: MGYG000004735_17_28
Type: TC
Location: 20593 - 21444 (+)
Type: TC
Location: 20593 - 21444 (+)
Gene ID: MGYG000004735_17_29
Type: TC
Location: 21444 - 22283 (+)
Type: TC
Location: 21444 - 22283 (+)
Gene ID: MGYG000004735_17_30
Type: CAZyme
Location: 22326 - 23813 (+)
Type: CAZyme
Location: 22326 - 23813 (+)
Gene ID: MGYG000004735_17_31
Type: TF
Location: 24018 - 25040 (+)
Type: TF
Location: 24018 - 25040 (+)
Gene ID: MGYG000004735_17_32
Type: TC
Location: 25077 - 25949 (+)
Type: TC
Location: 25077 - 25949 (+)
Gene ID: MGYG000004735_17_33
Type: TC
Location: 25939 - 26787 (+)
Type: TC
Location: 25939 - 26787 (+)
Gene ID: MGYG000004735_17_34
Type: TC
Location: 26866 - 27684 (+)
Type: TC
Location: 26866 - 27684 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp900757145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.