Cluster: MGYG000004735_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004735
- CGC Family ID: CGCFAM_02592
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004735_1 | MGYG000004735_1_2 | 1200 | 3629 | - | GH2 |
| CAZyme | MGYG000004735_1 | MGYG000004735_1_3 | 3727 | 5958 | - | GH3 |
| CAZyme | MGYG000004735_1 | MGYG000004735_1_4 | 5961 | 9059 | - | GH38 |
| CAZyme | MGYG000004735_1 | MGYG000004735_1_5 | 9139 | 11070 | - | GH20 |
| pfam | MGYG000004735_1 | MGYG000004735_1_6 | 11257 | 12678 | - | SBP_bac_1 | DUF3502 |
| TC | MGYG000004735_1 | MGYG000004735_1_7 | 12774 | 13700 | - | 3.A.1.1.29 |
| TC | MGYG000004735_1 | MGYG000004735_1_8 | 13713 | 14672 | - | 3.A.1.1.25 |
Gene ID: MGYG000004735_1_2
Type: CAZyme
Location: 1200 - 3629 (-)
Type: CAZyme
Location: 1200 - 3629 (-)
Gene ID: MGYG000004735_1_3
Type: CAZyme
Location: 3727 - 5958 (-)
Type: CAZyme
Location: 3727 - 5958 (-)
Gene ID: MGYG000004735_1_4
Type: CAZyme
Location: 5961 - 9059 (-)
Type: CAZyme
Location: 5961 - 9059 (-)
Gene ID: MGYG000004735_1_5
Type: CAZyme
Location: 9139 - 11070 (-)
Type: CAZyme
Location: 9139 - 11070 (-)
Gene ID: MGYG000004735_1_6
Type: pfam
Location: 11257 - 12678 (-)
Type: pfam
Location: 11257 - 12678 (-)
Gene ID: MGYG000004735_1_7
Type: TC
Location: 12774 - 13700 (-)
Type: TC
Location: 12774 - 13700 (-)
Gene ID: MGYG000004735_1_8
Type: TC
Location: 13713 - 14672 (-)
Type: TC
Location: 13713 - 14672 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp900757145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.