Cluster: MGYG000004725_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004725
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004725_3 | MGYG000004725_3_118 | 157500 | 158909 | + | 3.A.24.3.1 |
| pfam | MGYG000004725_3 | MGYG000004725_3_119 | 158902 | 159747 | + | Hydrolase | S6PP | Hydrolase_3 |
| TF | MGYG000004725_3 | MGYG000004725_3_120 | 159941 | 160153 | + | CSD |
| TC | MGYG000004725_3 | MGYG000004725_3_121 | 160468 | 161835 | + | 2.A.22.5.3 |
| pfam | MGYG000004725_3 | MGYG000004725_3_122 | 161849 | 162370 | + | Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10 |
| pfam | MGYG000004725_3 | MGYG000004725_3_123 | 162441 | 164690 | - | SLH | FG-GAP_3 | FG-GAP_3 |
| CAZyme | MGYG000004725_3 | MGYG000004725_3_124 | 164827 | 165927 | - | GT2 |
| pfam | MGYG000004725_3 | MGYG000004725_3_125 | 165977 | 166411 | - | Collagen |
| TC | MGYG000004725_3 | MGYG000004725_3_126 | 166563 | 169157 | - | 3.A.9.1.2 |
| STP | MGYG000004725_3 | MGYG000004725_3_127 | 169460 | 170653 | + | Aminotran_1_2 |
| pfam | MGYG000004725_3 | MGYG000004725_3_128 | 170659 | 171363 | + | DUF2461 |
| CAZyme | MGYG000004725_3 | MGYG000004725_3_129 | 171417 | 172148 | + | CE4 |
Gene ID: MGYG000004725_3_118
Type: TC
Location: 157500 - 158909 (+)
Type: TC
Location: 157500 - 158909 (+)
Gene ID: MGYG000004725_3_119
Type: pfam
Location: 158902 - 159747 (+)
Type: pfam
Location: 158902 - 159747 (+)
Gene ID: MGYG000004725_3_120
Type: TF
Location: 159941 - 160153 (+)
Type: TF
Location: 159941 - 160153 (+)
Gene ID: MGYG000004725_3_121
Type: TC
Location: 160468 - 161835 (+)
Type: TC
Location: 160468 - 161835 (+)
Gene ID: MGYG000004725_3_122
Type: pfam
Location: 161849 - 162370 (+)
Type: pfam
Location: 161849 - 162370 (+)
Gene ID: MGYG000004725_3_123
Type: pfam
Location: 162441 - 164690 (-)
Type: pfam
Location: 162441 - 164690 (-)
Gene ID: MGYG000004725_3_124
Type: CAZyme
Location: 164827 - 165927 (-)
Type: CAZyme
Location: 164827 - 165927 (-)
Gene ID: MGYG000004725_3_125
Type: pfam
Location: 165977 - 166411 (-)
Type: pfam
Location: 165977 - 166411 (-)
Gene ID: MGYG000004725_3_126
Type: TC
Location: 166563 - 169157 (-)
Type: TC
Location: 166563 - 169157 (-)
Gene ID: MGYG000004725_3_127
Type: STP
Location: 169460 - 170653 (+)
Type: STP
Location: 169460 - 170653 (+)
Gene ID: MGYG000004725_3_128
Type: pfam
Location: 170659 - 171363 (+)
Type: pfam
Location: 170659 - 171363 (+)
Gene ID: MGYG000004725_3_129
Type: CAZyme
Location: 171417 - 172148 (+)
Type: CAZyme
Location: 171417 - 172148 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
MGBC124762
Species
MGBC124762 sp900554075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.