Cluster: MGYG000004706_CGC4
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004706
- CGC Family ID: CGCFAM_02461
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004706_1 | MGYG000004706_1_179 | 209452 | 209727 | + | 3.A.1.1.8 |
| TC | MGYG000004706_1 | MGYG000004706_1_180 | 209749 | 210243 | + | 3.A.1.20.1 |
| pfam | MGYG000004706_1 | MGYG000004706_1_181 | 210253 | 211854 | + | BPD_transp_1 | BPD_transp_1 |
| TF | MGYG000004706_1 | MGYG000004706_1_182 | 211876 | 212763 | + | 0040266 |
| CAZyme | MGYG000004706_1 | MGYG000004706_1_183 | 212773 | 213921 | + | GT4 |
| CAZyme | MGYG000004706_1 | MGYG000004706_1_184 | 214090 | 214959 | + | GT2 |
| CAZyme | MGYG000004706_1 | MGYG000004706_1_185 | 214986 | 216002 | + | GT2 |
| pfam | MGYG000004706_1 | MGYG000004706_1_186 | 216006 | 216833 | - | LicD |
| CAZyme | MGYG000004706_1 | MGYG000004706_1_187 | 216957 | 217895 | + | GT2 |
Gene ID: MGYG000004706_1_179
Type: TC
Location: 209452 - 209727 (+)
Type: TC
Location: 209452 - 209727 (+)
Gene ID: MGYG000004706_1_180
Type: TC
Location: 209749 - 210243 (+)
Type: TC
Location: 209749 - 210243 (+)
Gene ID: MGYG000004706_1_181
Type: pfam
Location: 210253 - 211854 (+)
Type: pfam
Location: 210253 - 211854 (+)
Gene ID: MGYG000004706_1_182
Type: TF
Location: 211876 - 212763 (+)
Type: TF
Location: 211876 - 212763 (+)
Gene ID: MGYG000004706_1_183
Type: CAZyme
Location: 212773 - 213921 (+)
Type: CAZyme
Location: 212773 - 213921 (+)
Gene ID: MGYG000004706_1_184
Type: CAZyme
Location: 214090 - 214959 (+)
Type: CAZyme
Location: 214090 - 214959 (+)
Gene ID: MGYG000004706_1_185
Type: CAZyme
Location: 214986 - 216002 (+)
Type: CAZyme
Location: 214986 - 216002 (+)
Gene ID: MGYG000004706_1_186
Type: pfam
Location: 216006 - 216833 (-)
Type: pfam
Location: 216006 - 216833 (-)
Gene ID: MGYG000004706_1_187
Type: CAZyme
Location: 216957 - 217895 (+)
Type: CAZyme
Location: 216957 - 217895 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Tractidigestivibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.