Cluster: MGYG000004706_CGC23
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004706
- CGC Family ID: CGCFAM_02946
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004706_3 | MGYG000004706_3_317 | 357790 | 359658 | + | GH2 |
| TC | MGYG000004706_3 | MGYG000004706_3_318 | 359896 | 360846 | + | 2.A.1.84.2 |
| TC | MGYG000004706_3 | MGYG000004706_3_319 | 360856 | 361041 | + | 2.A.1.84.2 |
| TF | MGYG000004706_3 | MGYG000004706_3_320 | 361373 | 363274 | + | HTH_11 | Mga |
| CAZyme | MGYG000004706_3 | MGYG000004706_3_321 | 363666 | 365060 | + | GH1 |
| TC | MGYG000004706_3 | MGYG000004706_3_322 | 365072 | 365368 | + | 4.A.3.2.2 |
| TC | MGYG000004706_3 | MGYG000004706_3_323 | 365390 | 366688 | + | 4.A.3.2.6 |
| TC | MGYG000004706_3 | MGYG000004706_3_324 | 366840 | 368249 | + | 2.A.1.3.30 |
Gene ID: MGYG000004706_3_317
Type: CAZyme
Location: 357790 - 359658 (+)
Type: CAZyme
Location: 357790 - 359658 (+)
Gene ID: MGYG000004706_3_318
Type: TC
Location: 359896 - 360846 (+)
Type: TC
Location: 359896 - 360846 (+)
Gene ID: MGYG000004706_3_319
Type: TC
Location: 360856 - 361041 (+)
Type: TC
Location: 360856 - 361041 (+)
Gene ID: MGYG000004706_3_320
Type: TF
Location: 361373 - 363274 (+)
Type: TF
Location: 361373 - 363274 (+)
Gene ID: MGYG000004706_3_321
Type: CAZyme
Location: 363666 - 365060 (+)
Type: CAZyme
Location: 363666 - 365060 (+)
Gene ID: MGYG000004706_3_322
Type: TC
Location: 365072 - 365368 (+)
Type: TC
Location: 365072 - 365368 (+)
Gene ID: MGYG000004706_3_323
Type: TC
Location: 365390 - 366688 (+)
Type: TC
Location: 365390 - 366688 (+)
Gene ID: MGYG000004706_3_324
Type: TC
Location: 366840 - 368249 (+)
Type: TC
Location: 366840 - 368249 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Tractidigestivibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.