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Cluster: MGYG000004705_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004705_13 MGYG000004705_13_13 12859 15303 - GH32
pfam MGYG000004705_13 MGYG000004705_13_14 15479 16690 - DUF4960
pfam MGYG000004705_13 MGYG000004705_13_15 16712 18394 - SusD_RagB | SusD-like_3
TC MGYG000004705_13 MGYG000004705_13_16 18415 21459 - 1.B.14.6.1
TF MGYG000004705_13 MGYG000004705_13_17 21869 24742 - HTH_AraC
NULL(UNKNOWN) MGYG000004705_13 MGYG000004705_13_18 24805 24945 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000004705_13 MGYG000004705_13_19 25080 26924 + GH32
TC MGYG000004705_13 MGYG000004705_13_20 26974 28155 + 2.A.1.7.17
Gene ID: MGYG000004705_13_13
Type: CAZyme
Location: 12859 - 15303 (-)
Gene ID: MGYG000004705_13_14
Type: pfam
Location: 15479 - 16690 (-)
Gene ID: MGYG000004705_13_15
Type: pfam
Location: 16712 - 18394 (-)
Gene ID: MGYG000004705_13_16
Type: TC
Location: 18415 - 21459 (-)
Gene ID: MGYG000004705_13_17
Type: TF
Location: 21869 - 24742 (-)
Gene ID: MGYG000004705_13_18
Type:
Location: 24805 - 24945 (+)
Gene ID: MGYG000004705_13_19
Type: CAZyme
Location: 25080 - 26924 (+)
Gene ID: MGYG000004705_13_20
Type: TC
Location: 26974 - 28155 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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