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Cluster: MGYG000004703_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004703_37 MGYG000004703_37_12 12153 13835 + 3.A.1.117.3
TC MGYG000004703_37 MGYG000004703_37_13 13978 14703 + 3.A.1.122.14
TC MGYG000004703_37 MGYG000004703_37_14 14714 15976 + 3.A.1.122.2
TC MGYG000004703_37 MGYG000004703_37_15 16035 17279 + 3.A.1.122.2
pfam MGYG000004703_37 MGYG000004703_37_16 17353 18465 + HlyD_3 | HlyD_D23
STP MGYG000004703_37 MGYG000004703_37_17 18580 19464 - PfkB
TC MGYG000004703_37 MGYG000004703_37_18 19497 20699 - 2.A.1.7.17
CAZyme MGYG000004703_37 MGYG000004703_37_19 20735 22396 - GH32
Gene ID: MGYG000004703_37_12
Type: TC
Location: 12153 - 13835 (+)
Gene ID: MGYG000004703_37_13
Type: TC
Location: 13978 - 14703 (+)
Gene ID: MGYG000004703_37_14
Type: TC
Location: 14714 - 15976 (+)
Gene ID: MGYG000004703_37_15
Type: TC
Location: 16035 - 17279 (+)
Gene ID: MGYG000004703_37_16
Type: pfam
Location: 17353 - 18465 (+)
Gene ID: MGYG000004703_37_17
Type: STP
Location: 18580 - 19464 (-)
Gene ID: MGYG000004703_37_18
Type: TC
Location: 19497 - 20699 (-)
Gene ID: MGYG000004703_37_19
Type: CAZyme
Location: 20735 - 22396 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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