Cluster: MGYG000004697_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004697
- CGC Family ID: CGCFAM_06666
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004697_6 | MGYG000004697_6_14 | 11371 | 12075 | - | 3.A.1.125.3 |
| STP | MGYG000004697_6 | MGYG000004697_6_15 | 12156 | 13148 | - | HATPase_c | HisKA |
| TF | MGYG000004697_6 | MGYG000004697_6_16 | 13138 | 13818 | - | Trans_reg_C |
| CAZyme | MGYG000004697_6 | MGYG000004697_6_17 | 13833 | 15992 | - | GH5_2 |
| pfam | MGYG000004697_6 | MGYG000004697_6_18 | 16010 | 16552 | - | DUF3877 |
| TC | MGYG000004697_6 | MGYG000004697_6_19 | 16567 | 17766 | - | 9.B.174.1.1 |
| STP | MGYG000004697_6 | MGYG000004697_6_20 | 17848 | 19137 | - | Peptidase_M23 |
| pfam | MGYG000004697_6 | MGYG000004697_6_21 | 19154 | 20065 | - | FtsX | FtsX_ECD |
| TC | MGYG000004697_6 | MGYG000004697_6_22 | 20052 | 20762 | - | 3.A.1.140.1 |
| pfam | MGYG000004697_6 | MGYG000004697_6_23 | 20807 | 21895 | - | HTH_30 | GGDEF_2 |
| TC | MGYG000004697_6 | MGYG000004697_6_24 | 22033 | 23145 | - | 3.A.1.1.26 |
| TC | MGYG000004697_6 | MGYG000004697_6_25 | 23276 | 24148 | - | 2.A.115.1.2 |
Gene ID: MGYG000004697_6_14
Type: TC
Location: 11371 - 12075 (-)
Type: TC
Location: 11371 - 12075 (-)
Gene ID: MGYG000004697_6_15
Type: STP
Location: 12156 - 13148 (-)
Type: STP
Location: 12156 - 13148 (-)
Gene ID: MGYG000004697_6_16
Type: TF
Location: 13138 - 13818 (-)
Type: TF
Location: 13138 - 13818 (-)
Gene ID: MGYG000004697_6_17
Type: CAZyme
Location: 13833 - 15992 (-)
Type: CAZyme
Location: 13833 - 15992 (-)
Gene ID: MGYG000004697_6_18
Type: pfam
Location: 16010 - 16552 (-)
Type: pfam
Location: 16010 - 16552 (-)
Gene ID: MGYG000004697_6_19
Type: TC
Location: 16567 - 17766 (-)
Type: TC
Location: 16567 - 17766 (-)
Gene ID: MGYG000004697_6_20
Type: STP
Location: 17848 - 19137 (-)
Type: STP
Location: 17848 - 19137 (-)
Gene ID: MGYG000004697_6_21
Type: pfam
Location: 19154 - 20065 (-)
Type: pfam
Location: 19154 - 20065 (-)
Gene ID: MGYG000004697_6_22
Type: TC
Location: 20052 - 20762 (-)
Type: TC
Location: 20052 - 20762 (-)
Gene ID: MGYG000004697_6_23
Type: pfam
Location: 20807 - 21895 (-)
Type: pfam
Location: 20807 - 21895 (-)
Gene ID: MGYG000004697_6_24
Type: TC
Location: 22033 - 23145 (-)
Type: TC
Location: 22033 - 23145 (-)
Gene ID: MGYG000004697_6_25
Type: TC
Location: 23276 - 24148 (-)
Type: TC
Location: 23276 - 24148 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp905212635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004697_6_16 | vegetarian > omnivore | 1.31864 | 0.01067 |
| MGYG000004697_6_16 | vegetarian > vegan | 2.04531 | 0.00305 |
| MGYG000004697_6_17 | vegetarian > vegan | 1.31879 | 0.00305 |
| MGYG000004697_6_19 | vegetarian > vegan | 1.21618 | 0.00305 |
| MGYG000004697_6_22 | vegetarian > vegan | 1.33682 | 0.00305 |