Cluster: MGYG000004697_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004697
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004697_3 | MGYG000004697_3_86 | 98163 | 100154 | + | 1.B.52.2.1 |
| pfam | MGYG000004697_3 | MGYG000004697_3_87 | 100326 | 101300 | + | Thiolase_N | ACP_syn_III_C | ACP_syn_III |
| pfam | MGYG000004697_3 | MGYG000004697_3_88 | 101290 | 102249 | + | SRP54 | cobW |
| TC | MGYG000004697_3 | MGYG000004697_3_89 | 102264 | 103025 | - | 1.A.16.3.2 |
| pfam | MGYG000004697_3 | MGYG000004697_3_90 | 103187 | 103666 | + | tRNA_edit |
| CAZyme | MGYG000004697_3 | MGYG000004697_3_91 | 103732 | 104544 | + | CE4 |
| pfam | MGYG000004697_3 | MGYG000004697_3_92 | 104605 | 104919 | - | DUF3892 |
| TC | MGYG000004697_3 | MGYG000004697_3_93 | 105015 | 106340 | + | 2.A.66.1.33 |
Gene ID: MGYG000004697_3_86
Type: TC
Location: 98163 - 100154 (+)
Type: TC
Location: 98163 - 100154 (+)
Gene ID: MGYG000004697_3_87
Type: pfam
Location: 100326 - 101300 (+)
Type: pfam
Location: 100326 - 101300 (+)
Gene ID: MGYG000004697_3_88
Type: pfam
Location: 101290 - 102249 (+)
Type: pfam
Location: 101290 - 102249 (+)
Gene ID: MGYG000004697_3_89
Type: TC
Location: 102264 - 103025 (-)
Type: TC
Location: 102264 - 103025 (-)
Gene ID: MGYG000004697_3_90
Type: pfam
Location: 103187 - 103666 (+)
Type: pfam
Location: 103187 - 103666 (+)
Gene ID: MGYG000004697_3_91
Type: CAZyme
Location: 103732 - 104544 (+)
Type: CAZyme
Location: 103732 - 104544 (+)
Gene ID: MGYG000004697_3_92
Type: pfam
Location: 104605 - 104919 (-)
Type: pfam
Location: 104605 - 104919 (-)
Gene ID: MGYG000004697_3_93
Type: TC
Location: 105015 - 106340 (+)
Type: TC
Location: 105015 - 106340 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp905212635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004697_3_89 | vegetarian > omnivore | 3.17947 | 0.01067 |
| MGYG000004697_3_89 | vegetarian > vegan | 3.30211 | 0.00305 |