Cluster: MGYG000004697_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004697
- CGC Family ID: CGCFAM_00149
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004697_31 | MGYG000004697_31_11 | 9724 | 10494 | - | 3.A.1.11.8 |
| STP | MGYG000004697_31 | MGYG000004697_31_12 | 10731 | 10898 | + | Fer4 | Fer4 |
| NULL(UNKNOWN) | MGYG000004697_31 | MGYG000004697_31_13 | 11168 | 11839 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004697_31 | MGYG000004697_31_14 | 11965 | 13020 | - | GT28 |
| pfam | MGYG000004697_31 | MGYG000004697_31_15 | 13054 | 13461 | - | HIT | DcpS_C |
| pfam | MGYG000004697_31 | MGYG000004697_31_16 | 13524 | 14519 | - | SCP2 |
| TC | MGYG000004697_31 | MGYG000004697_31_17 | 14519 | 15154 | - | 9.B.104.1.3 |
Gene ID: MGYG000004697_31_11
Type: TC
Location: 9724 - 10494 (-)
Type: TC
Location: 9724 - 10494 (-)
Gene ID: MGYG000004697_31_12
Type: STP
Location: 10731 - 10898 (+)
Type: STP
Location: 10731 - 10898 (+)
Gene ID: MGYG000004697_31_13
Type:
Location: 11168 - 11839 (-)
Type:
Location: 11168 - 11839 (-)
Gene ID: MGYG000004697_31_14
Type: CAZyme
Location: 11965 - 13020 (-)
Type: CAZyme
Location: 11965 - 13020 (-)
Gene ID: MGYG000004697_31_15
Type: pfam
Location: 13054 - 13461 (-)
Type: pfam
Location: 13054 - 13461 (-)
Gene ID: MGYG000004697_31_16
Type: pfam
Location: 13524 - 14519 (-)
Type: pfam
Location: 13524 - 14519 (-)
Gene ID: MGYG000004697_31_17
Type: TC
Location: 14519 - 15154 (-)
Type: TC
Location: 14519 - 15154 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp905212635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004697_31_14 | vegetarian > vegan | 3.08910 | 0.00305 |