Cluster: MGYG000004697_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004697
- CGC Family ID: CGCFAM_02463
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004697_25 | MGYG000004697_25_31 | 31003 | 31650 | - | GH25 |
| STP | MGYG000004697_25 | MGYG000004697_25_32 | 31718 | 32785 | - | Aminotran_1_2 |
| STP | MGYG000004697_25 | MGYG000004697_25_33 | 32798 | 33982 | - | Aminotran_1_2 |
| TC | MGYG000004697_25 | MGYG000004697_25_34 | 34062 | 36146 | - | 1.B.52.2.1 |
Gene ID: MGYG000004697_25_31
Type: CAZyme
Location: 31003 - 31650 (-)
Type: CAZyme
Location: 31003 - 31650 (-)
Gene ID: MGYG000004697_25_32
Type: STP
Location: 31718 - 32785 (-)
Type: STP
Location: 31718 - 32785 (-)
Gene ID: MGYG000004697_25_33
Type: STP
Location: 32798 - 33982 (-)
Type: STP
Location: 32798 - 33982 (-)
Gene ID: MGYG000004697_25_34
Type: TC
Location: 34062 - 36146 (-)
Type: TC
Location: 34062 - 36146 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp905212635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004697_25_31 | vegetarian > vegan | 1.86626 | 0.00305 |
| MGYG000004697_25_32 | vegetarian > vegan | 1.26115 | 0.00305 |
| MGYG000004697_25_34 | vegetarian > vegan | 1.58695 | 0.00305 |